Carey-Ann D Burnham

Washington University in St. Louis, San Luis, Missouri, United States

Are you Carey-Ann D Burnham?

Claim your profile

Publications (101)468.91 Total impact

  • [Show abstract] [Hide abstract]
    ABSTRACT: Norovirus is the most common cause of sporadic gastroenteritis and outbreaks worldwide. The rapid identification of norovirus has important implications for infection prevention measures, and may reduce the need for additional diagnostic testing. The Xpert Norovirus Assay recently received FDA clearance for the detection and differentiation of norovirus genogroups I and II (GI and GII), which account for the vast majority of infections. In this study, we evaluated the performance of the Xpert Norovirus Assay with both fresh, prospectively collected (n=914) and frozen, archived (n=489) fecal specimens. A Centers for Disease Control (CDC) composite reference method was used as the gold standard for comparison. For both prospective and frozen specimens, the Xpert Norovirus Assay showed a positive percent agreement (PPA) and negative percent agreement (NPA) of 98.3% and 98.1% for GI, and 99.4% and 98.2% for GII, respectively. Norovirus prevalence in the prospective specimens (collected from March to May of 2014) was 9.9% (n=90), with the majority of positives caused by genogroup II (82%, n=74). The positive predictive value (PPV) of the Xpert Norovirus Assay was 75% for GI whereas it was 86.5% for GII positive specimens. The negative predictive value (NPV) for GI and GII was 100% and 99.9%, respectively.
    Journal of clinical microbiology 11/2015; DOI:10.1128/JCM.02361-15 · 3.99 Impact Factor
  • [Show abstract] [Hide abstract]
    ABSTRACT: Historically, a number of typing methods have been evaluated for Staphylococcus aureus strain characterization. The emergence of contemporary strains of community-associated S. aureus, and the ensuing epidemic with a predominant strain type (USA300), necessitates re-evaluation of the discriminatory power of these typing methods for discerning molecular epidemiology and transmission dynamics, essential to investigations of hospital and community outbreaks. We compared the discriminatory index of 5 typing methods for contemporary S. aureus strain characterization.Children presenting to St. Louis Children's Hospital and community pediatric practices in St. Louis, Missouri (MO), with community-associated S. aureus infections were enrolled. Repetitive sequence-based PCR (repPCR), pulsed-field gel electrophoresis (PFGE), multilocus sequence typing (MLST), staphylococcal protein A (spa), and staphylococcal cassette chromosome (SCC) mec typing were performed on 200 S. aureus isolates. The discriminatory index of each method was calculated using the standard formula for this metric, where a value of 1 is highly discriminatory and a value of 0 is not discriminatory.Overall, we identified 26 distinct strain types by repPCR, 17 strain types by PFGE, 30 strain types by MLST, 68 strain types by spa typing, and 5 strain types by SCCmec typing. RepPCR had the highest discriminatory index (D) of all methods (D = 0.88), followed by spa typing (D = 0.87), MLST (D = 0.84), PFGE (D = 0.76), and SCCmec typing (D = 0.60). The method with the highest D among MRSA isolates was repPCR (D = 0.64) followed by spa typing (D = 0.45) and MLST (D = 0.44). The method with the highest D among MSSA isolates was spa typing (D = 0.98), followed by MLST (D = 0.93), repPCR (D = 0.92), and PFGE (D = 0.89). Among isolates designated USA300 by PFGE, repPCR was most discriminatory, with 10 distinct strain types identified (D = 0.63). We identified 45 MRSA isolates which were classified as identical by PFGE, MLST, spa typing, and SCCmec typing (USA300, ST8, t008, SCCmec IV, respectively); within this collection, there were 5 distinct strain types identified by repPCR.The typing methods yielded comparable discriminatory power for S. aureus characterization overall; when discriminating among USA300 isolates, repPCR retained the highest discriminatory power. This property is advantageous for investigations conducted in the era of contemporary S. aureus infections.
    Medicine 09/2015; 94(37):e1534. DOI:10.1097/MD.0000000000001534 · 5.72 Impact Factor
  • Source
    [Show abstract] [Hide abstract]
    ABSTRACT: Methicillin-resistant Staphylococcus aureus (MRSA) is one of the most prevalent multidrug-resistant pathogens worldwide, exhibiting increasing resistance to the latest antibiotic therapies. Here we show that the triple β-lactam combination meropenem-piperacillin-tazobactam (ME/PI/TZ) acts synergistically and is bactericidal against MRSA subspecies N315 and 72 other clinical MRSA isolates in vitro and clears MRSA N315 infection in a mouse model. ME/PI/TZ suppresses evolution of resistance in MRSA via reciprocal collateral sensitivity of its constituents. We demonstrate that these activities also extend to other carbapenem-penicillin-β-lactamase inhibitor combinations. ME/PI/TZ circumvents the tight regulation of the mec and bla operons in MRSA, the basis for inducible resistance to β-lactam antibiotics. Furthermore, ME/PI/TZ subverts the function of penicillin-binding protein-2a (PBP2a) via allostery, which we propose as the mechanism for both synergy and collateral sensitivity. Showing in vivo activity similar to that of linezolid, ME/PI/TZ demonstrates that combinations of older β-lactam antibiotics could be effective against MRSA infections in humans.
    Nature Chemical Biology 09/2015; 11(11):855. DOI:10.1038/nchembio.1911 · 13.00 Impact Factor
  • Erik R Dubberke · Carey-Ann D Burnham ·

    JAMA Internal Medicine 09/2015; DOI:10.1001/jamainternmed.2015.4607 · 13.12 Impact Factor
  • Source
    [Show abstract] [Hide abstract]
    ABSTRACT: Clostridium difficile infections (CDI) are the most common cause of healthcare-associated infections (HAI) in the USA, accounting for 12 % of all HAIs [1]. Reasons for such an increase are unknown but may relate to antibiotic use and evolution of a new, pathogenic strain, NAP1/BI/027. The Centers for Disease Control and Prevention (CDC) identifies C. difficile as one of only three organisms to be assigned a designation of an "urgent" threat level. Asymptomatic colonization with C. difficile is much more common than symptomatic CDI and has been documented to contribute to new cases of CDI. Despite this knowledge, approaches to managing and preventing transmission from asymptomatically colonized patients are lacking. Enhanced cleaning, avoidance of unnecessary antimicrobials, and use of gowns and gloves for patients with CDI are the cornerstone of C. difficile management in patients with known disease. Infection control interventions to prevent transmission from asymptomatically colonized patients have not been determined.
    Current Infectious Disease Reports 09/2015; 17(9):499. DOI:10.1007/s11908-015-0499-0 · 1.68 Impact Factor
  • [Show abstract] [Hide abstract]
    ABSTRACT: This was a randomized controlled pilot study of Lactobacillus rhamnosus GG versus standard of care to prevent gastrointestinal multidrug-resistant organism colonization in intensive care unit patients. Among 70 subjects, there were no significant differences in acquisition or loss of any multidrug-resistant organisms (P>.05) and no probiotic-associated adverse events. Infect. Control Hosp. Epidemiol. 2015;00(0):1���4.
    Infection Control and Hospital Epidemiology 08/2015; -1:1-4. DOI:10.1017/ice.2015.195 · 4.18 Impact Factor
  • Mark D Gonzalez · Meghan A Wallace · Tiffany Hink · Erik R Dubberke · Carey-Ann D Burnham ·
    [Show abstract] [Hide abstract]
    ABSTRACT: Ceftolozane/tazobactam (C/T) is approved for treatment of complicated intra-abdominal and urinary tract infections; C/T has variable activity against anaerobic bacteria. Here, we evaluate the activity of C/T against a phylogenetically diverse collection of C. difficile isolates, and report uniformly high minimum inhibitory concentrations (≥256 μg/mL) to C/T. Copyright © 2015, American Society for Microbiology. All Rights Reserved.
    Antimicrobial Agents and Chemotherapy 08/2015; DOI:10.1128/AAC.01670-15 · 4.48 Impact Factor
  • [Show abstract] [Hide abstract]
    ABSTRACT: Our objective was to determine antibiotic susceptibility profiles of Staphylococcus aureus isolates recovered from 110 households of children with community-onset methicillin-resistant S. aureus (MRSA) infections. Cultures were obtained from household members, household objects, and dogs and cats, yielding 1,633 S. aureus isolates. The S. aureus isolates were heterogeneous, although more than half were methicillin-resistant. The highest proportion of MRSA was found in bathrooms. The majority of isolates were susceptible to antibiotics prescribed in outpatient settings. Copyright © 2015, American Society for Microbiology. All Rights Reserved.
    Antimicrobial Agents and Chemotherapy 07/2015; 59(10). DOI:10.1128/AAC.01492-15 · 4.48 Impact Factor
  • [Show abstract] [Hide abstract]
    ABSTRACT: Infections cause morbidity and mortality in neonatal intensive care units (NICUs). The association between nursery design and nosocomial infections is unclear. OBJECTIVE To determine whether rates of colonization by methicillin-resistant Staphylococcus aureus (MRSA), late-onset sepsis, and mortality are reduced in single-patient rooms. DESIGN Retrospective cohort study. SETTING NICU in a tertiary referral center. METHODS Our NICU is organized into single-patient and open-unit rooms. Clinical data sets including bed location and microbiology results were examined over 29 months. Differences in outcomes between bed configurations were determined by χ 2 and Cox regression. PATIENTS All NICU patients. RESULTS Among 1,823 patients representing 55,166 patient-days, single-patient and open-unit models had similar incidences of MRSA colonization and MRSA colonization-free survival times. Average daily census was associated with MRSA colonization rates only in single-patient rooms (hazard ratio, 1.31; P=. 039), whereas hand hygiene compliance on room entry and exit was associated with lower colonization rates independent of bed configuration (hazard ratios, 0.834 and 0.719 per 1% higher compliance, respectively). Late-onset sepsis rates were similar in single-patient and open-unit models as were sepsis-free survival and the combined outcome of sepsis or death. After controlling for demographic, clinical, and unit-based variables, multivariate Cox regression demonstrated that bed configuration had no effect on MRSA colonization, late-onset sepsis, or mortality. CONCLUSIONS MRSA colonization rate was impacted by hand hygiene compliance, regardless of room configuration, whereas average daily census affected only infants in single-patient rooms. Single-patient rooms did not reduce the rates of MRSA colonization, late-onset sepsis, or death. Infect Control Hosp Epidemiol 2015;00(0):1–10
    Infection Control and Hospital Epidemiology 06/2015; -1:1-10. DOI:10.1017/ice.2015.144 · 4.18 Impact Factor
  • Allison R McMullen · Caline Mattar · Nigar Kirmani · Carey-Ann D Burnham ·
    [Show abstract] [Hide abstract]
    ABSTRACT: Mycobacterium spp. are a rare cause of endocarditis. Herein, we describe a case of Mycobacterium mageritense prosthetic valve endocarditis. This organism produced an unusual brown pigment on solid media. Cultures of valve tissue for acid fast bacilli might be considered in some cases of apparently culture negative prosthetic valve endocarditis. Copyright © 2015, American Society for Microbiology. All Rights Reserved.
    Journal of clinical microbiology 06/2015; 53(8). DOI:10.1128/JCM.01041-15 · 3.99 Impact Factor
  • Source
    [Show abstract] [Hide abstract]
    ABSTRACT: To characterize the genomic context of New Delhi metallo-β-lactamase-1 (NDM-1) and Klebsiella pneumoniae carbapenemase (KPC), we sequenced 78 Enterobacteriaceae isolates from Pakistan and the United States encoding KPC, NDM-1, or no carbapenemase. High similarities of the results indicate rapid spread of carbapenem resistance between strains, including globally disseminated pathogens.
    Emerging infectious diseases 06/2015; 21(6). DOI:10.3201/eid2106.141504 · 6.75 Impact Factor
  • [Show abstract] [Hide abstract]
    ABSTRACT: Asymptomatic colonization may contribute to Clostridium difficile transmission. Few data identify which patients are at risk for colonization. We performed a prospective cohort study of C. difficile colonization and risk factors for C. difficile acquisition and loss in hospitalized patients. Patients admitted to medical or surgical wards at a tertiary-care hospital were enrolled; interviews and chart review were performed to determine demographics, C. difficile infection (CDI) history, medications, and healthcare exposures. Stool samples/rectal swabs were collected at enrollment and discharge; stool samples from clinical laboratory tests were also included. Samples were cultured for C. difficile, and isolates tested for toxins A and B, and ribotyped. Chi square tests and univariate logistic regression were used for analyses. 235 patients were enrolled. 21% of patients were colonized with C. difficile (toxigenic and non-toxigenic) at admission and 24% at discharge. Ribotype 027 accounted for 6% of strains at admission and 12% at discharge. 78% of patients colonized at admission were also colonized at discharge. Cephalosporin use was associated with C. difficile acquisition (47% of patients who acquired C. difficile vs. 25% of patients who did not; p=0.03). Beta-lactam/beta-lactamase inhibitor combinations were associated with loss of C. difficile colonization (36% of patients who lost C. difficile colonization vs. 8% of patients colonized on both admission and discharge; p=0.04), as was metronidazole (27% vs. 3%; p=0.03). Antibiotic use affects the epidemiology of asymptomatic C. difficile colonization, including acquisition and loss, and requires additional study. Copyright © 2015, American Society for Microbiology. All Rights Reserved.
    Antimicrobial Agents and Chemotherapy 05/2015; 59(8). DOI:10.1128/AAC.00642-15 · 4.48 Impact Factor
  • Craig B Wilen · Allison R McMullen · Carey-Ann D Burnham ·
    [Show abstract] [Hide abstract]
    ABSTRACT: When mycobacteria are recovered in clinical specimens, timely species-level identification is required to establish the clinical significance of the isolate and facilitate optimization of antimicrobial therapy. Matrix assisted laser desorption-time of flight mass spectrometry (MALDI-TOF MS) has recently been reported to be a reliable and expedited method for identification of mycobacteria, although variable specimen preparation techniques and databases for analysis are reported across studies. Here we compared two MALDI-TOF MS instrumentation platforms and three databases: Bruker Biotyper Real Time Classification 3.1 (Biotyper), VITEK MS Plus Saramis Premium (Saramis), and VITEK MS v3.0. We evaluated two sample preparation techniques and demonstrate that extraction methods are not interchangeable across different platforms or databases. Once testing parameters were established, a panel of 157 mycobacteria isolates (including 16 Mycobacterium tuberculosis isolates) was evaluated, demonstrating that with the appropriate specimen preparation, all three methods provide reliable identification for most species. Using a score cutoff of ≥ 1.8, the Biotyper correctly identified 133 (84.7%) isolates with no misidentifications. Using a confidence value of ≥ 90%, Saramis correctly identified 134 (85.4%) isolates with one misidentification and VITEK MS v3.0 correctly identified 140 (89.2%) isolates with one misidentification. The accuracy was not significantly different across the three platforms (p=0.14). In addition we show that VITEK MS v3.0 requires modestly fewer repeat analyses compared to the Biotyper and Saramis methods (p=0.04) which may have implications for laboratory workflow. Copyright © 2015, American Society for Microbiology. All Rights Reserved.
    Journal of clinical microbiology 05/2015; 53(7). DOI:10.1128/JCM.00567-15 · 3.99 Impact Factor
  • Source
    [Show abstract] [Hide abstract]
    ABSTRACT: Background: The reservoir of pathogenic ciprofloxacin-resistant Escherichia coli remains unknown. Methods: We conducted a prospective cohort study of 80 healthy twins and their mothers to determine the frequency of excretion of ciprofloxacin-resistant, potentially pathogenic E. coli. Stool specimens were cultured selectively for ciprofloxacin-resistant gram-negative bacteria. Isolates were categorized on the basis of additional resistance and virulence profiles. We also prospectively collected clinical metadata. Results: Fifteen children (19%) and 8 mothers (20%) excreted ciprofloxacin-resistant E. coli at least once. Overall, 33% of 40 families had at least 1 member whose stool specimen yielded ciprofloxacin-resistant E. coli on culture. Fifty-seven submitted stool specimens (2.8%) contained such organisms; clones ST131-H30 and ST405 accounted for 52 and 5 of the positive specimens, respectively. Length of hospital stay after birth (P = .002) and maternal colonization (P = .0001) were associated with subsequent childhood carriage of ciprofloxacin-resistant E. coli; antibiotic use, acid suppression, sex, mode of delivery, and maternal perinatal antibiotic use were not. Ciprofloxacin-resistant E. coli were usually resistant to additional antibiotic classes, and all had virulence genotypes typical of extraintestinal pathogenic E. coli. Conclusions: Healthy children and their mothers commonly harbor ciprofloxacin-resistant E. coli with pathogenic potential.
    The Journal of Infectious Diseases 05/2015; DOI:10.1093/infdis/jiv278 · 6.00 Impact Factor
  • [Show abstract] [Hide abstract]
    ABSTRACT: Matrix-assisted laser desorption/ionization-time of flight (MALDI-TOF) mass spectrometry (MS) has revolutionized the identification of clinical bacterial and yeast isolates. However, data describing the reproducibility of MALDI-TOF MS for microbial identification are scarce. In this study, we show that MALDI-TOF MS-based microbial identification is highly reproducible and can tolerate numerous variables, including differences in testing environments, instruments, operators, reagent lots, and sample positioning patterns. Finally, we reveal that samples of bacterial and yeast isolates prepared for MALDI-TOF MS identification can be repeatedly analyzed without compromising organism identification. Copyright © 2015, American Society for Microbiology. All Rights Reserved.
    Journal of clinical microbiology 04/2015; 53(7). DOI:10.1128/JCM.00187-15 · 3.99 Impact Factor
  • Lemuel R. Non · Allison Nazinitsky · Mark D Gonzalez · Carey-Ann D Burnham · Rupa Patel ·
    [Show abstract] [Hide abstract]
    ABSTRACT: We report two cases of bacteremia with Actinobaculum schaalii, a rarely reported, anaerobic, Gram-positive bacterium. The first case was a patient with renal cancer who developed pyelonephritis after cryoablation, and the second was a patient who developed sepsis after a urogenital procedure. Bacteremia resolved after administration of empiric antibiotic therapy. Copyright © 2015. Published by Elsevier Ltd.
    Anaerobe 04/2015; 34. DOI:10.1016/j.anaerobe.2015.04.006 · 2.48 Impact Factor
  • Morgan A. Pence · Carey-Ann D. Burnham ·

    Journal of Global Antimicrobial Resistance 04/2015; 3(2). DOI:10.1016/j.jgar.2015.03.004 · 1.09 Impact Factor
  • Mark D. Gonzalez · Craig B. Wilen · Carey-Ann D. Burnham ·
    [Show abstract] [Hide abstract]
    ABSTRACT: Infectious diarrhea is a major cause of morbidity. A rapid and inexpensive assay for the diagnosis of infectious gastroenteritis would expedite appropriate therapy and prevent unnecessary and potentially invasive testing. This article summarizes assays for the diagnosis of infectious gastroenteritis based on the host response to bacterial, viral, or parasitic infection. This includes both systemic biomarkers (such as C-reactive protein, erythrocyte sedimentation rate, and serum cytokines) and fecal biomarkers (such as lactoferrin, fecal leukocyte analysis, and calprotectin). Although some of these assays have value as adjunct diagnostics, they lack sensitivity and specificity as stand-alone tests in this setting. Copyright © 2015 Elsevier Inc. All rights reserved.
    Clinics in laboratory medicine 03/2015; 35(2). DOI:10.1016/j.cll.2015.02.001 · 1.37 Impact Factor
  • Source
    [Show abstract] [Hide abstract]
    ABSTRACT: Infections with chlorophyllic algae are uncommon. Invasive infection with Desmodesmus armatus developed in two patients independently after they each sustained a penetrating freshwater injury.
    New England Journal of Medicine 03/2015; 372(10):982-4. DOI:10.1056/NEJMc1401816 · 55.87 Impact Factor
  • [Show abstract] [Hide abstract]
    ABSTRACT: The proliferation of genetically modified mouse models has exposed phenotypic variation between investigators and institutions that has been challenging to control1, 2, 3, 4, 5. In many cases, the microbiota is the presumed cause of the variation. Current solutions to account for phenotypic variability include littermate and maternal controls or defined microbial consortia in gnotobiotic mice6, 7. In conventionally raised mice, the microbiome is transmitted from the dam2, 8, 9. Here we show that microbially driven dichotomous faecal immunoglobulin-A (IgA) levels in wild-type mice within the same facility mimic the effects of chromosomal mutations. We observe in multiple facilities that vertically transmissible bacteria in IgA-low mice dominantly lower faecal IgA levels in IgA-high mice after co-housing or faecal transplantation. In response to injury, IgA-low mice show increased damage that is transferable by faecal transplantation and driven by faecal IgA differences. We find that bacteria from IgA-low mice degrade the secretory component of secretory IgA as well as IgA itself. These data indicate that phenotypic comparisons between mice must take into account the non-chromosomal hereditary variation between different breeders. We propose faecal IgA as one marker of microbial variability and conclude that co-housing and/or faecal transplantation enables analysis of progeny from different dams.
    Nature 02/2015; 521(7550). DOI:10.1038/nature14139 · 41.46 Impact Factor

Publication Stats

697 Citations
468.91 Total Impact Points


  • 2010-2015
    • Washington University in St. Louis
      • • Department of Medicine
      • • Department of Pathology and Immunology
      • • Department of Pediatrics
      San Luis, Missouri, United States
  • 2011
    • Washington & Lee University
      Лексингтон, Virginia, United States
  • 2003-2011
    • University of Alberta
      • Department of Laboratory Medicine and Pathology
      Edmonton, Alberta, Canada