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ABSTRACT: Seed coat post harvest darkening (PHD) represents a problem for producers and consumers of several market classes of dry bean. There are three PHD phenotypes: (1) non-darkening (ND), (2) slow darkening (SD) and (3) regular darkening (RD). The inheritance of PHD was elucidated by evaluating populations derived from crosses among multiple RD, SD and ND genotypes. Results indicate that at least two unlinked major genes control the PHD trait in common bean. Recessive epistasis with three phenotypic classes explains the segregation ratios of populations from crosses between SD and ND parents. One gene, J, is responsible for whether a bean will darken as seeds from plants that are jj do not darken at all. Another gene, sd, influences how quickly a seed coat will darken with sdsd individuals darkening more slowly than those with the dominant Sd allele.
Theoretical and Applied Genetics 08/2011; 123(8):1467-72. · 3.30 Impact Factor
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ABSTRACT: Environmental effects on polyphenolic composition of pigmented seed coat tissue were examined in four black bean genotypes, grown in four locations in Canada. Genotype was the most significant determinant in the phenotypic expression of flavonoid traits across four locations (p < 0.0001). The genotype x environment interaction was not significantly different for anthocyanin or extractable condensed tannin (syn. proanthocyanidin) but was significant for the bound anthocyanidin concentration (p < 0.05). One trace metabolite, (-)-epicatechin, was identified, but no flavonols were detected in the seed coats. Sequestration of anthocyanin in the seed coat was genotype-dependent and predominantly consisted of delphinidin with lesser amounts of petunidin and malvidin. Pigment sequestration in the two integument layers of the seed coat appeared to be mutually exclusive across all genotypes in terms of the pigment chemical character. Tissue-specific accumulation of extractable and bound anthocyanin in the outer integument was observed. The inner integument was devoid of anthocyanin, and the pigment consisted solely of condensed tannin inclusions. The occurrence of condensed tannin together with anthocyanin pigments, whether extractable or bound either by oxidation or by cross-linking, influenced the visual uniformity of seeds of bean cultivars. The co-occurrence of these compounds could have an effect on postharvest appearance during storage, on canning quality, and on the dietary effects of the putative functional food profile in the black bean market class.
Journal of Agricultural and Food Chemistry 06/2010; 58(11):7001-6. · 2.82 Impact Factor
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ABSTRACT: Postharvest darkening of pinto bean (Phaseolus vulgaris L.) was evaluated in a population of recombinant inbred lines derived from a cross between CDC Pintium (a regular-darkening line) and 1533-15 (a slow-darkening line). Flavonoid metabolite concentrations, polyphenol oxidase activity, lignin concentration, and seed coat anatomy characteristics were assessed for cosegregation with the darkening phenotype. Significantly lower kaempferol concentrations (p = 0.00001) together with differences in polyphenol oxidase activity (p = 0.0045) were two of the key findings associated with these recombinant inbred lines. In addition, two different assays (thioglycolic acid and Klason lignin) to quantify lignin together with an assessment of extractable condensed tannin were used to estimate the contribution of these polymers to changes in the seed coat tissue. This is the first report of precise biochemical characterization of polyphenolics that associate with postharvest darkening in legumes.
Journal of Agricultural and Food Chemistry 09/2008; 56(16):7049-56. · 2.82 Impact Factor
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ABSTRACT: Proanthocyanidins and flavonoids were isolated and identified from seed coats of two aged and nonaged pinto bean lines: 1533-15 and CDC Pintium. The seed coat of 1533-15 darkens slowly and never darkens to the same extent as CDC Pintium. Analysis of the overall level of proanthocyanidins using a vanillin assay demonstrated that aged and nonaged seed coats of CDC Pintium had significantly higher levels of proanthocyanidins than aged and nonaged 1533-15 seed coats. Aged and nonaged seed coats of both lines were found to contain one main flavonol monomer, kaempferol, and three minor flavonols, kaempferol 3-O-glucoside, kaempferol 3-O-glucosylxylose, and kaempferol 3-O-acetylglucoside. These compounds were identified by NMR and ESI-MS analysis (except for kaempferol 3-O-acetylglucoside, which was tentatively identified only by ESI-MS analysis) and quantified using HPLC-DAD. The combined concentrations of all the kaempferol compounds in seed coats of CDC Pintium were significantly higher than in seed coats of 1533-15, and the combined contents did not change after aging. The content of kaempferol decreased nearly by half in the seed coats of CDC Pintium after aging, whereas no significant change was observed in the seed coats of 1533-15. Proanthocyanidin fractions from both lines, aged and nonaged, were subjected to LC-MS/MS analysis and found to be composed primarily of procyanidins. Procyanidins in the seed coats were predominantly polymers with the degree of polymers higher than 10. The proportion of these polymers decreased after aging, while that of the low-molecular-weight procyanidins increased. A catechin-kaempferol adduct was tentatively identified in both lines by LC-MS/MS, and the concentration increased in the seed coats after aging.
Journal of Agricultural and Food Chemistry 11/2005; 53(20):7777-82. · 2.82 Impact Factor
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ABSTRACT: Three Raphanus populations (BC1, F2 and R8) each segregating for the restoration of Ogura CMS were used tomap restorer loci. The three restorer loci, Rf1, Rf2 and Rf3, each exhibited dominant restoring alleles and wereeach mutually epistatic. Rf1 was mapped to the upper region of Rs1 using data from each population. Rf2 wasmapped to the middle of Rs2 using both the F2 and R8 populations. Rf3 was mapped to the upper region of Rs7using the R8 population. The marker analysis and linkage mapping of the BC1 and F2 populations were describedpreviously (Bett and Lydiate, 2003). Scoring at 114 marker loci in R8 population allowed a new map ofthe Raphanus genome to be integrated with the consensus map. The complex genetic control of the restoration ofOgura CMS in Raphanus is compared with the more simple genetic control of this trait previously described inB. napus. Markers linked to each of the three restorer loci will allow the routine generation and verification ofdefined restorer and maintainer lines for various combinations of defined restorer loci. Although the restorationof Ogura CMS in Raphanus probably involves additional loci, the identification of three loci and diagnosticmarkers for each provides a solid foundation for the development of a holistic model for the genetic control ofthis trait through mapping in additional populations.
Molecular Breeding 01/2004; 13(2):125-133. · 2.85 Impact Factor
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ABSTRACT: The first genetic map of the Raphanus genome was developed based on meiosis in a hybrid between Raphanus sativus (cultivated radish) and Raphanus raphanistrum (wild radish). This hybrid was used to produce a BC1 population of 54 individuals and an F2 population of 85 individuals. A total of 236 marker loci were assayed in these populations using a set of 144 informative Brassica RFLP probes previously used for genetic mapping in other crucifer species. The genetic maps derived from the BC1 and F2 populations were perfectly collinear and were integrated to produce a robust Raphanus map. Cytological observations demonstrated strict bivalent pairing in the R. sativus x R. raphanistrum hybrids. Productive pairing along the length of each chromosome was confirmed by the identification of nine extensive linkage groups and the lack of clustering of marker loci. Indeed, the distributions of both marker loci and crossovers was more random than those reported for other crop species. The genetic markers and the reference map of Raphanus will be of considerable value for future trait mapping and marker-assisted breeding in this crop, as well as in the intergenomic transfer of Raphanus genes into Brassica crops. The future benefits of comparative mapping with Arabidopsis and Brassica species are also discussed.
Genome 07/2003; 46(3):423-30. · 1.65 Impact Factor
