J. Dijkstra

University of Guelph, Guelph, Ontario, Canada

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Publications (263)196.61 Total impact

  • Article: Modeling the efficiency of phosphorus utilization in growing pigs.
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    ABSTRACT: Microbial phytase has been used to reduce P excretion from swine to mitigate environmental pollution. The objective of the study was to quantify the effect of feeding a low-P phytase-supplemented diet on growth and P utilization in growing pigs using mathematical models. A total of 20 weaned piglets (BW = 6.5 kg) housed in metabolism cages were randomly assigned to a standard diet (STD) or P-amended diet containing reduced P content and supplemented with phytase (AMN) with 10 pigs/diet. Body weight and feed consumption were recorded weekly so complete growth and cumulative P intake (cPI) curves could be modeled. A function with fixed point of inflexion (Gompertz) and a variable point of inflexion (generalized Michaelis-Menten) were considered in determining bioequivalence by analyzing BW vs. age relationships, whereas the monomolecular function was used to describe BW vs. cPI. All functions were incorporated into a nonlinear mixed effects model, and a first-order autoregressive correlation structure was implemented to take into account repeated measures. There was no difference between the 2 groups in final BW when the Gompertz equation was fitted (176 vs. 178 kg with SE of 7 kg for the STD and AMN, respectively) or the rate parameter (0.0140 vs. 0.0139 with SE of 0.0004 for the STD and AMN, respectively). The generalized Michaelis-Menten equation also showed a similar trend. When BW was expressed as a function of cPI the derivative with respect to cPI represented P efficiency, so it was possible to analyze the expected difference of the 2 diets in using P for BW gain and express it as a continuous function of cPI. The analysis showed through the entire growth period the difference in P efficiency was different from zero. On average, 56 g of supplemented inorganic P was consumed by a pig fed the AMN to reach market weight. In contrast, 309 g of supplemented inorganic P was consumed by the group fed the STD to reach similar BW. It would depend on other factors, but feeding pigs the AMN can result in economic benefit. Pigs fed the AMN excreted 19% less P compared with those fed the STD. In conclusion, nonlinear mixed model analysis (with repeated measures) was suitable for growth and efficiency analysis and showed that pigs fed the AMN consumed less than 20% of the inorganic P and performed as well as those fed the traditional inorganic P supplemented diet. The implications for mitigating P pollution, especially in areas where P loading is already problematic, are substantial.
    Journal of Animal Science 04/2011; 89(9):2774-81. · 2.10 Impact Factor
  • Article: Effects of feeding rapeseed oil, soybean oil, or linseed oil on stearoyl-CoA desaturase expression in the mammary gland of dairy cows.
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    ABSTRACT: Stearoyl-CoA desaturase (SCD) is an important enzyme in the bovine mammary gland, and it introduces a double bond at the Δ(9) location of primarily myristoyl-, palmitoyl-, and stearoyl-CoA. The main objective of this study was to compare the effects of various fatty acids (FA) typically present in dairy cow rations on the expression of SCD1 and SCD5 in the mammary gland of dairy cows. Twenty-eight Holstein-Friesian cows were randomly assigned to 1 of 4 dietary treatments. The dietary treatments were a basal diet supplemented (dry matter basis) with 2.7% rapeseed oil as a source of C18:1 cis-9; 2.7% soybean oil as a source of C18:2 cis-9,12; 2.7% linseed oil as a source of C18:3 cis-9,12,15; or 2.7% of a 1:1:1 mixture of the 3 oils. The oil supplements were included in the concentrate, which was fed together with corn silage and grass silage. In addition, cows were grazing on pasture, consisting mainly of perennial ryegrass, during the day. Biopsies from the mammary gland were taken and analyzed for mRNA expression of SCD1 and SCD5 by using quantitative real-time PCR. Milk yield as well as milk protein and fat contents did not differ among the 4 dietary treatments. Dietary supplementation with rapeseed oil and linseed oil increased proportions of C18:1 cis-9 and C18:3 cis-9,12,15 in blood plasma, respectively, compared with the other treatments. Supplementation with soybean oil and linseed oil increased milk FA proportions of C18:2 cis-9,12 and C18:3 cis-9,12,15, respectively, but supplementation with rapeseed oil did not increase C18:1 cis-9 in milk. Mammary SCD1 expression was reduced by supplementation of soybean oil compared with rapeseed oil and linseed oil. In contrast, SCD5 expression did not differ among the 4 treatments. The C16 and C18 desaturation indices, representing proxies for SCD activity, were lower for the soybean oil diet compared with the diet supplemented with a mixture of the 3 oils. In conclusion, our study shows that mammary SCD1 expression is significantly downregulated in dairy cows by feeding unprotected soybean oil compared with rapeseed oil or linseed oil, and this is partially reflected by the lower desaturase indices in the milk. Furthermore, mammary SCD5 expression appears to be differently regulated than expression of SCD1.
    Journal of Dairy Science 02/2011; 94(2):874-87. · 2.56 Impact Factor
  • Chapter: Prediction of methane production in beef cattle within a mechanistic digestion model
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    ABSTRACT: Methane is produced by ruminants as the result of microbial digestion, it represents an energy loss to the animal, and it is also a potent greenhouse gas. Mechanistic modelling can lend insight into dietary strategies aimed at reducing methane emissions from cattle, but require proper representation of aspects of underlying rumen fermentation and digestion. Proper prediction of the production of volatile fatty acids (VFA) is central to accurate methane prediction. This study evaluated the newly updated and expanded model of VFA dynamics developed by Bannink et al. (2008), in comparison to a previous model version (Bannink et al., 2006), within a rumen model (Dijkstra et al., 1992; modified by Mills et al., 2001) for its methane prediction ability in beef cattle fed high-grain diets. In an evaluation of the rumen model performed by Kebreab et al. (2008) using the Bannink et al. (2006) VFA stoichiometry, the model performed well on dairy cow data, but poorly on beef cattle data in predicting methane emission. Several modifications were therefore made to the model to adapt it for typical high-grain beef cattle diets and then evaluated for its accuracy to predict methane emissions from feedlot cattle. Passage rate of protozoa was increased proportionally with the grain percent of the diet, and the protozoal proportion of the amylolytic microbial pool was reduced accordingly. This allowed a small cellulolytic microbial pool to remain in the rumen, where it previously went extinct. Also, stoichiometry of rumen VFA production was adjusted for the use of monensin in the observed data. Preliminary results showed that while the representation of some central aspects of rumen fermentation probably improved, the model over-predicted methane production with a root mean square prediction error value of 2.86 MJ/d, with 56% of that error coming from bias and 44% from random sources. Concordance correlation coefficient value was 0.194. Results indicate that other areas of the model require improvement for predicting methane production accurately in high grain feedlot diets, such as hind gut fibre digestibility. Keywordsbeef cattle]–high grain–monensin–methane–modelling
    12/2010: pages 181-188;
  • Chapter: Effects of nutritional strategies on simulated nitrogen excretion and methane emission in dairy cattle
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    ABSTRACT: To assess the relation between emission of methane (CH4) and faecal and urinary losses of nitrogen (N) in dairy cattle, various dietary strategies were evaluated using a mechanistic model of fermentation and digestion processes. To simulate faecal and urinary composition, an extant dynamic, mechanistic model of rumen function and post-absorptive nutrient supply was extended with static equations that describe intestinal digestion and hindgut fermentation. The extended model predicts organic matter, carbon and N output in faeces and urine. Methane emissions were simulated using the same model including a mechanistic description of methanogenesis in the rumen and in the hindgut. Four different types of grass silage were explored at high and low N fertilization levels and early or late cutting. For each grass silage, 10 supplementation strategies that differed in level and type of supplement (no supplement, maize silage, straw, beet pulp, potatoes) and level of concentrate (20 or 40% of total diet DM) were studied. Simulated total N and CH4 excretion ranged from 211 to 588 g/d and 334 to 441 g/d, respectively, with a small, positive correlation (r2=0.15). When expressed per unit fat and protein corrected milk (FPCM), a reduced N excretion (g N/kg FPCM) was associated with increased CH4 emission (g CH4 / kg FPCM) although the coefficient of determination was small (r2=0.22). This relationship varied between different treatments. For example, reducing N fertilization level lowered N excretion per kg FPCM, but increased CH4 emission per kg FPCM, whereas supplementation with maize silage reduced both N excretion and CH4 emission per kg FPCM. The ratio of urea-N in urine to total N excretion was negatively related to emission of CH4 per kg FPCM (r2=0.54). This is of particular concern since urea in the urine, being quickly converted to ammonia, is susceptible to rapid volatilization. The present simulations indicate that measures to reduce N pollution from dairy cattle may increase CH4 emission and highlight an important area for experimental research. Keywordsmodelling–manure composition–greenhouse gases–livestock
    12/2010: pages 394-402;
  • Chapter: A generic multi-stage compartmental model for interpreting gas production profiles
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    ABSTRACT: The gas production technique has become a key tool in feed evaluation and rumen fermentation studies. The value of the technique relies on modelling experimental data to obtain estimates of rumen degradation parameters. One of the first models used to describe gas production profiles was the simple exponential equation, although it has some important limitations when applied to gas production curves: (1) the intercept is positive, (2) only fits diminishing returns profiles, and (3) models gas per se (i.e. fails to link gas production to substrate degradation). The first limitation is overcome mathematically by re-parameterisation, making the intercept zero. The second limitation can be resolved by introducing a discrete lag to mimic sigmoidicity or by using sigmoidal functions. The third limitation is overcome by modelling substrate degradation from gas production profiles, so that equations are derived from mechanistic principles, and all parameters have biological meaning. The link between substrate degradation and gas production allows for extent of substrate degradation in the rumen to be determined for a given passage rate. Several multi-phase models have been proposed, but these were originally derived empirically and assumptions made a posteriori. Based on the conceptual difference between stage and phase, a multi-stage approach is proposed, a generic model presented and the accompanying equations derived. A two-stage model with four pools (substrate, intermediate products, fermentation end-products and by-products such as fermentation gas) is illustrated. An interpretation of the breakdown of polysaccharides to monosaccharides (first stage) and the fermentation of these monosaccharides to yield gas and other products (VFA and microbial matter) (second stage) is presented. Gas production profiles were used to demonstrate fitting the two-stage model and to consider its ability to describe gas production curves. Keywordsrumen fermentation kinetics–gas production curves–non-linear models– in vitro
    12/2010: pages 139-147;
  • Chapter: Modelling the profile of growth in monogastric animals
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    ABSTRACT: Growth functions have been used in animal science for over a century to summarize time course data on the growth of an organism. The chapter aims to review growth functions that have been used in monogastric animal nutrition. Although the Gompertz equation (1825) has been used extensively, particularly to describe growth in pigs, alternative functions have been shown to perform better. The Gompertz and the logistic equations have a fxed point of inflexion while the Richards, López (Morgan) and von Bertanalffy equations have a fexible point of inflexion. This might give the latter an advantage over simpler equations, despite an additional parameter required to obtain fexibility. In almost all studies that compared growth equations, the López (Morgan) equation has consistently shown to be superior to the other equations in describing pig and poultry growth data. An additional important point is that time course data by nature are repeated measures on the same animal or group of animals, therefore, consideration of correlation structure is needed when using any type of growth function. All studies reviewed showed that an autoregressive correlation structure improved equation prediction significantly and should be part of the analysis. Most growth functions struggle to come up with a good estimate of initial body weight regardless of fitting procedure. However, because the objective of using a growth function is primarily to estimate rate of. and time to reach market weight, this limitation does not preclude their use in animal science. Keywordsgrowth functions–nonlinear mixed models–pigs–poultry
    12/2010: pages 386-393;
  • Article: Effects of chemically or technologically treated linseed products and docosahexaenoic acid addition to linseed oil on biohydrogenation of C18:3n-3 in vitro.
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    ABSTRACT: Rumen biohydrogenation kinetics of C18:3n-3 from several chemically or technologically treated linseed products and docosahexaenoic acid (DHA; C22:6n-3) addition to linseed oil were evaluated in vitro. Linseed products evaluated were linseed oil, crushed linseed, formaldehyde treated crushed linseed, sodium hydroxide/formaldehyde treated crushed linseed, extruded whole linseed (2 processing variants), extruded crushed linseed (2 processing variants), micronized crushed linseed, commercially available extruded linseed, lipid encapsulated linseed oil, and DHA addition to linseed oil. Each product was incubated with rumen liquid using equal amounts of supplemented C18:3n-3 and fermentable substrate (freeze-dried total mixed ration) for 0, 0.5, 1, 2, 4, 6, 12, and 24h using a batch culture technique. Disappearance of C18:3n-3 was measured to estimate the fractional biohydrogenation rate and lag time according to an exponential model and to calculate effective biohydrogenation of C18:3n-3, assuming a fractional passage rate of 0.060/h. Treatments showed no differences in rumen fermentation parameters, including gas production rate and volatile fatty acid concentration. Technological pretreatment (crushing) followed by chemical treatment applied as formaldehyde of linseed resulted in effective protection of C18:3n-3 against biohydrogenation. Additional chemical pretreatment (sodium hydroxide) before applying formaldehyde treatment did not further improve the effectiveness of protection. Extrusion of whole linseed compared with extrusion of crushed linseed was effective in reducing C18:3n-3 biohydrogenation, whereas the processing variants were not different in C18:3n-3 biohydrogenation. Crushed linseed, micronized crushed linseed, lipid encapsulated linseed oil, and DHA addition to linseed oil did not reduce C18:3n-3 biohydrogenation. Compared with the other treatments, docosahexaenoic acid addition to linseed oil resulted in a comparable trans11,cis15-C18:2 biohydrogenation but a lesser trans10+11-C18:1 biohydrogenation. This suggests that addition of DHA in combination with linseed oil was effective only in inhibiting the last step of biohydrogenation from trans10+11-C18:1 to C18:0.
    Journal of Dairy Science 11/2010; 93(11):5286-99. · 2.56 Impact Factor
  • Article: Evaluation of a mechanistic lactation model using cow, goat and sheep data
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    ABSTRACT: A mechanistic lactation model, based on a theory of mammary cell proliferation and cell death, was studied and compared to the equation of Wood (1967). Lactation curves of British Holstein Friesian cows (176 curves), Spanish Churra sheep (40 curves) and Spanish Murciano–Granadina goats (30 curves) were used for model evaluation. Both models were fitted in their original form using non-linear least squares estimation. The parameters were compared among species and among parity groups within species.
    The Journal of Agricultural Science 05/2010; 148(03):249 - 262. · 2.04 Impact Factor
  • Article: Simulating the effects of grassland management and grass ensiling on methane emission from lactating cows
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    ABSTRACT: A dynamic, mechanistic model of enteric fermentation was used to investigate the effect of type and quality of grass forage, dry matter intake (DMI) and proportion of concentrates in dietary dry matter (DM) on variation in methane (CH4) emission from enteric fermentation in dairy cows. The model represents substrate degradation and microbial fermentation processes in rumen and hindgut and, in particular, the effects of type of substrate fermented and of pH on the production of individual volatile fatty acids and CH4 as end-products of fermentation. Effects of type and quality of fresh and ensiled grass were evaluated by distinguishing two N fertilization rates of grassland and two stages of grass maturity. Simulation results indicated a strong impact of the amount and type of grass consumed on CH4 emission, with a maximum difference (across all forage types and all levels of DMI) of 49 and 77% in g CH4/kg fat and protein corrected milk (FCM) for diets with a proportion of concentrates in dietary DM of 0·1 and 0·4, respectively (values ranging from 10·2 to 19·5 g CH4/kg FCM). The lowest emission was established for early cut, high fertilized grass silage (GS) and high fertilized grass herbage (GH). The highest emission was found for late cut, low-fertilized GS. The N fertilization rate had the largest impact, followed by stage of grass maturity at harvesting and by the distinction between GH and GS. Emission expressed in g CH4/kg FCM declined on average 14% with an increase of DMI from 14 to 18 kg/day for grass forage diets with a proportion of concentrates of 0·1, and on average 29% with an increase of DMI from 14 to 23 kg/day for diets with a proportion of concentrates of 0·4. Simulation results indicated that a high proportion of concentrates in dietary DM may lead to a further reduction of CH4 emission per kg FCM mainly as a result of a higher DMI and milk yield, in comparison to low concentrate diets. Simulation results were evaluated against independent data obtained at three different laboratories in indirect calorimetry trials with cows consuming GH mainly. The model predicted the average of observed values reasonably, but systematic deviations remained between individual laboratories and root mean squared prediction error was a proportion of 0·12 of the observed mean. Both observed and predicted emission expressed in g CH4/kg DM intake decreased upon an increase in dietary N:organic matter (OM) ratio. The model reproduced reasonably well the variation in measured CH4 emission in cattle sheds on Dutch dairy farms and indicated that on average a fraction of 0·28 of the total emissions must have originated from manure under these circumstances.
    The Journal of Agricultural Science 01/2010; 148(01):55 - 72. · 2.04 Impact Factor
  • Article: Seasonal variation in the Dutch bovine raw milk composition.
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    ABSTRACT: In this study, we determined the detailed composition of and seasonal variation in Dutch dairy milk. Raw milk samples representative of the complete Dutch milk supply were collected weekly from February 2005 until February 2006. Large seasonal variation exists in the concentrations of the main components and milk fatty acid composition. Milk lactose concentration was rather constant throughout the season. Milk true protein content was somewhat more responsive to season, with the lowest content in June (3.21 g/100 g) and the highest content in December (3.38 g/100 g). Milk fat concentration increased from a minimum of 4.10 g/100 g in June to a maximum of 4.57 g/100 g in January. The largest (up to 2-fold) seasonal changes in the fatty acid composition were found for trans fatty acids, including conjugated linoleic acid. Milk protein composition was rather constant throughout the season. Milk unsaturation indices, which were used as an indication of desaturase activity, were lowest in spring and highest in autumn. Compared with a previous investigation of Dutch dairy milk in 1992, the fatty acid composition of Dutch raw milk has changed considerably, in particular with a higher content of saturated fatty acids in 2005 milk.
    Journal of Dairy Science 10/2009; 92(10):4745-55. · 2.56 Impact Factor
  • Article: Development and evaluation of a dynamic model of calcium and phosphorus flows in layers.
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    ABSTRACT: Phosphorus is an essential nutrient involved in most metabolic processes. Most of the interest in Ca metabolism relates to eggshell formation. Although the eggshell is composed of Ca carbonate, metabolism of both Ca and P is closely related such that a deficiency in one can interfere with proper utilization of the other. To understand Ca and P metabolism properly, modeling can be of paramount importance. A new dynamic and mechanistic model of P and Ca metabolism in layers has been developed to simulate diurnal changes in Ca and P and the hourly requirement of the layer for those minerals. The model consists of 8 state variables representing Ca and P pools in the crop, stomachs, plasma, and bone. The flow equations are described by Michaelis-Menten or mass action forms. An experiment that measured Ca and P uptake in layers fed different Ca concentrations during shell-forming days was used for model evaluation. The experiment showed that Ca retained in body and egg decreased from 62.5 to 50.5% of Ca intake when the Ca in diet was increased from 25 to 45 mg/g of feed. The model simulations were in agreement with the trend. Predictions of Ca retention in bone and egg were 63.2, 56.1, and 55.3% for low, medium, and high dietary Ca concentrations. The experimental results showed that P retention in body and egg increased significantly from 11.5% of absorbable P intake at the lowest Ca inclusion concentration to 24.1% at the highest. The model also predicted an increase in P retention in bone and egg from 8.4 to 25.4% of absorbable P intake at the lowest and highest concentration of Ca inclusion, respectively. The advantage of the model is that absorption and utilization can be monitored on an hourly basis and that adjustments can be made accordingly. The model successfully showed how the availability of one mineral affects the utilization of the other and is a useful tool to evaluate feeding strategies aimed at reducing P excretion to the environment in poultry manure.
    Poultry Science 04/2009; 88(3):680-9. · 1.73 Impact Factor
  • Article: The effect of silage and concentrate type on intake behavior, rumen function, and milk production in dairy cows in early and late lactation.
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    ABSTRACT: The objective of this experiment was to evaluate the effect of feeding total mixed rations (TMR) that differ in structural and nonstructural carbohydrates to dairy cows in early and late lactation on short-term feed intake, dry matter intake (DMI), rumen fermentation variables, and milk yield. A 5 x 5 Latin square experiment with 15 dairy cows was repeated during early and late lactation. The 5 treatments were a TMR with (all on dry matter basis) 55% roughage (a 50:50 mixture of corn silage and grass silage) and 45% concentrate (a 50:50 mixture of concentrate rich in structural carbohydrates and concentrate rich in nonstructural carbohydrates; treatment CON), a TMR with the concentrate mixture and 55% grass silage (RGS) or 55% corn silage (RCS), and a TMR with the roughage mixture and 45% of the concentrate rich in structural carbohydrates (CSC) or the concentrate rich in nonstructural carbohydrates (CNS). Meal criteria, determined using the Gaussian-Gaussian-Weibull method per animal per treatment, showed an interaction between lactation stage and treatment. Feed intake behavior variables were therefore calculated with meal criteria per treatment-lactation stage combination. Differences in feed intake behavior were more pronounced between treatments differing in roughage composition than between treatments differing in concentrate composition, probably related to larger differences in chemical composition and particle size between corn silage and grass silage than between the 2 concentrates. The number of meals was similar between treatments, but eating time was greater in RGS (227 min/d) and lesser in RCS (177 min/d) than the other treatments. Intake rate increased when the amount of grass silage decreased, whereas meal duration decreased simultaneously. These effects were in line with a decreased DMI of the RGS diet vs. the other treatments, probably related to the high neutral detergent fiber (NDF) content. However, this effect was not found in CSC, although NDF content of the TMR, fractional clearance rate of NDF, and fractional degradation rate of NDF was similar between CSC and RGS. Rumen fluid pH was lesser, and molar proportions of acetic acid and of propionic acid were lesser and greater, respectively, in RCS compared with all other diets. Milk production did not differ between treatments. There was no effect of type of concentrate on milk composition, but diet RCS resulted in a lesser milk fat content and greater milk protein content than diet RGS. Lactation stage did affect short-term feed intake behavior and DMI, although different grass silages were fed during early and late lactation. The results indicate that short-term feed intake behavior is related to DMI and therefore may be a helpful tool in optimizing DMI and milk production in high-production dairy cows.
    Journal of Dairy Science 01/2009; 91(12):4778-92. · 2.56 Impact Factor
  • Article: Effect of dietary starch or micro algae supplementation on rumen fermentation and milk fatty acid composition of dairy cows.
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    ABSTRACT: Two experiments with rumen-fistulated dairy cows were conducted to evaluate the effects of feeding docosahexaenoic acid (DHA; C22:6 n-3)-enriched diets or diets provoking a decreased rumen pH on milk fatty acid composition. In the first experiment, dietary treatments were tested during 21-d experimental periods in a 4 x 4 Latin square design. Diets included a control diet, a starch-rich diet, a bicarbonate-buffered starch-rich diet, and a diet supplemented with DHA-enriched micro algae [Schizochytrium sp., 43.0 g/kg of dry matter intake (DMI)]. Algae were supplemented directly through the rumen fistula. The total mixed ration consisted of grass silage, corn silage, soybean meal, and a standard or glucogenic concentrate. The glucogenic and buffered glucogenic diet had no effect on rumen fermentation and milk fatty acid composition because, unexpectedly, no reduced rumen pH was detected. The algae diet had no effect on rumen pH but provoked decreased butyrate and increased isovalerate molar proportions in the rumen. In addition, algae supplementation affected rumen biohydrogenation of linoleic and linolenic acid as reflected in the modified milk fatty acid composition toward increased conjugated linoleic acid (CLA) cis-9 trans-11, CLA trans-9 cis-11, C18:1 trans-10, C18:1 trans-11, and C22:6 n-3 concentrations. Concomitantly, on average, a 45% decrease in DMI and milk yield was observed. Based on these drastic and impractical results, a second animal experiment was performed for 20 d in which 9.35 g/kg of total DMI of algae were incorporated in the concentrate and supplemented to 3 rumen-fistulated cows. Algae concentrate feeding increased rumen pH, which was associated with decreased rumen short-chain fatty acid concentrations. Moreover, a different shift in rumen short-chain fatty acid proportions was observed compared with the first experiment because molar proportions of butyrate, isobutyrate, and isovalerate increased, whereas acetate molar proportion decreased. The milk fatty acid profile changed as in experiment 1. However, the decrease in DMI and milk yield was less pronounced (on average 10%) at this algae supplementation level, whereas milk fat percentage decreased from 47.9 to 22.0 g/kg of milk after algae treatment. In conclusion, an algae supplementation level of about 10 g/kg of DMI proved effective to reduce the milk fat content and to modify the milk fatty acid composition toward increased CLA cis-9 trans-11, C18:1 trans, and DHA concentrations.
    Journal of Dairy Science 01/2009; 91(12):4714-27. · 2.56 Impact Factor
  • Article: Recent advances in modeling nutrient utilization in ruminants.
    E Kebreab, J Dijkstra, A Bannink, J France
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    ABSTRACT: Mathematical modeling techniques have been applied to study various aspects of the ruminant, such as rumen function, postabsorptive metabolism, and product composition. This review focuses on advances made in modeling rumen fermentation and its associated rumen disorders, and energy and nutrient utilization and excretion with respect to environmental issues. Accurate prediction of fermentation stoichiometry has an impact on estimating the type of energy-yielding substrate available to the animal, and the ratio of lipogenic to glucogenic VFA is an important determinant of methanogenesis. Recent advances in modeling VFA stoichiometry offer ways for dietary manipulation to shift the fermentation in favor of glucogenic VFA. Increasing energy to the animal by supplementing with starch can lead to health problems such as subacute rumen acidosis caused by rumen pH depression. Mathematical models have been developed to describe changes in rumen pH and rumen fermentation. Models that relate rumen temperature to rumen pH have also been developed and have the potential to aid in the diagnosis of subacute rumen acidosis. The effect of pH has been studied mechanistically, and in such models, fractional passage rate has a large impact on substrate degradation and microbial efficiency in the rumen and should be an important theme in future studies. The efficiency with which energy is utilized by ruminants has been updated in recent studies. Mechanistic models of N utilization indicate that reducing dietary protein concentration, matching protein degradability to the microbial requirement, and increasing the energy status of the animal will reduce the output of N as waste. Recent mechanistic P models calculate the P requirement by taking into account P recycled through saliva and endogenous losses. Mechanistic P models suggest reducing current P amounts for lactating dairy cattle to at least 0.35% P in the diet, with a potential reduction of up to 1.3 kt/yr. A model that integrates nutrient utilization and health has great potential benefit for ruminant nutrition research. Finally, whole-animal or farm level models are discussed. An example that used a multiple-criteria decision-making framework is reviewed, and the approach is considered to be appropriate in dealing with the multidimensional nature of agricultural systems and can be applied to assist the decision process in cattle operations.
    Journal of Animal Science 10/2008; 87(14 Suppl):E111-22. · 2.10 Impact Factor
  • Article: Accumulation of trans C18:1 fatty acids in the rumen after dietary algal supplementation is associated with canges in the Butyrivibrio communitytrans
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    ABSTRACT: Optimization of the fatty acid composition of ruminant milk and meat is desirable. Dietary supplementation of algae was previously shown to inhibit rumen biohydrogenation, resulting in an altered milk fatty acid profile. Bacteria involved in biohydrogenation belong to the Butyrivibrio group. This study was aimed at relating accumulation of biohydrogenation intermediates with shifts in Butyrivibrio spp. in the rumen of dairy cows. Therefore, an experiment was performed with three rumen-fistulated dairy cows receiving a concentrate containing algae (9.35 g/kg total dry matter [DM] intake) for 20 days. Supplementation of the diet with algae inhibited biohydrogenation of C18:2 omega 6 (n-6) and C18:3 n-3, resulting in increased concentrations of biohydrogenation intermediates, whereas C18:0 decreased. Addition of algae increased ruminal C18:1 trans fatty acid concentrations, mainly due to 6- and 20-fold increases in C18:1 trans 11 (t11) and C18:1 t10. The number of ciliates (5.37 log copies/g rumen digesta) and the composition of the ciliate community were unaffected by dietary algae. In contrast, supplementation of the diet with algae changed the composition of the bacterial community. Primers for the Butyrivibrio group, including the genera Butyrivibrio and Pseudobutyrivibrio, were specifically designed. Denaturing gradient gel electrophoresis showed community changes upon addition of algae without affecting the total amount of Butyrivibrio bacteria (7.06 log copies/g rumen DM). Clone libraries showed that algae affected noncultivated species, which cluster taxonomically between the genera Butyrivibrio and Pseudobutyrivibrio and might play a role in biohydrogenation. In addition, 20% of the clones from a randomly selected rumen sample were related to the C18:0-producing branch, although the associated C18:0 concentration decreased through supplementation of the diet with algae
    Applied and environmental microbiology 10/2008; · 3.69 Impact Factor
  • Article: Frequent allocation of rotationally grazed dairy cows changes grazing behavior and improves productivity.
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    ABSTRACT: Twenty Holstein cows were blocked in 2 groups according to milk yield to evaluate the effect of frequency of allocation to new grazing plots on pasture intake, grazing behavior, rumen characteristics, and milk yield. The 2 treatments, daily allocation to 0.125-ha plots (1D) or allocation every 4 d to 0.5-ha plots (4D) of Lolium perenne L., were tested in a randomized block design (2 rotations with 3 or 4 measuring periods of 4 d each) with mixed model analysis accounting for repeated measures. There were no differences in the chemical composition of offered pasture and in pasture dry matter intake (DMI) between 1D and 4D. However, an interaction between treatment and rotation indicated a difference in pasture DMI between treatments during the first rotation (4D, 16.5 vs. 1D, 18.3 kg/d) but not during the second rotation (4D, 15.0 vs. 1D, 14.7 kg/d), possibly a result of a greater pasture mass in the first rotation. Grazing time (average 562 min/d) and ruminating time (average 468 min/d), observed using IGER graze recorders, were similar between treatments, but grazing time increased numerically (549 to 568 min/d), and ruminating time decreased linearly (471 to 450 min/d) within periods in the 4D treatment. Mean rumen pH (6.16 vs. 6.05) and rumen NH(3)-N concentration (113.7 vs. 90.1 mg/L) were higher in 4D than in 1D, and total volatile fatty acid (VFA) concentrations did not differ. Molar proportions of VFA, except butyrate, differed between treatments, causing the nonglucogenic to glucogenic VFA ratio to be greater in 4D than in 1D. Within days in the 4D treatment, the molar proportion of acetate increased and those of all other VFA decreased linearly. Rumen NH(3)-N concentration within the 4D treatment declined quadratically from 170.3 mg/L on d 1 to 80.7 mg/L on d 4. In contrast to rumen NH(3)-N concentration, milk urea content did not differ between treatments, but decreased quadratically from d 1 to 4 in the 4D treatment (from 26.7 to 20.7 mg/dL). Mean fat- and protein-corrected milk was greater in 1D than in 4D (23.5 vs. 22.8 kg/d), mainly due to a difference in milk yield (24.5 vs. 23.7 kg/d). Fat and protein content were slightly lower in the 1D than in the 4D treatment (3.66 vs. 3.76% and 3.28 vs. 3.34%, respectively). This study confirmed that increasing pasture allocation frequency from once every 4 d to every day improved milk production in grazing dairy cows, especially when offered pasture was high.
    Journal of Dairy Science 06/2008; 91(5):2033-45. · 2.56 Impact Factor
  • Article: Effect of in vitro docosahexaenoic acid supplementation to marine algae-adapted and unadapted rumen inoculum on the biohydrogenation of unsaturated fatty acids in freeze-dried grass.
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    ABSTRACT: The objective of this study was to examine the ruminal biohydrogenation of linoleic (18:2n-6) and linolenic (18:3n-3) acid during in vitro incubations with rumen inoculum from dairy cattle adapted or not to marine algae and with or without additional in vitro docosahexaenoic acid (DHA, 22:6n-3) supplementation. Treatments were incubated in 100-mL flasks containing 400 mg of freeze-dried grass, 5 mL of strained ruminal fluid, and 20 mL of phosphate buffer. Ruminal fluid was collected just before the morning feeding from 3 cows receiving a control diet (49% ryegrass silage, 39% corn silage, 1% straw, and 11% concentrate, fresh-weight basis) supplemented with marine algae for 21 d (adapted rumen fluid, aRF) or from the same cows receiving the control diet only for 14 d after marine algae supplementation was stopped (unadapted rumen fluid, uRF). In half of the incubation flasks, pure DHA (5 mg) was added as an oil-ethanol solution (100 mL). Incubations were carried out during 0, 0.5, 1, 2, 4, 6, and 24 h. After 24 h, in vitro addition of DHA resulted in greater amounts (mg/incubation) of 18:3n-3 (0.23, 0.43, 0.26, and 0.34 for aRF, aRF+DHA, uRF, and uRF+DHA), 18:2n-6 (0.14, 0.22, 0.15, and 0.20 for aRF, aRF+DHA, uRF, and uRF+DHA) and trans-11, cis-15-18:2 (0.27, 2.40, 0.06, and 2.21 for aRF, aRF+DHA, uRF, and uRF+DHA), whereas no effect of inoculum source was observed. Trans-11-18:1 accumulated after 24 h when aRF was incubated irrespective of in vitro DHA supplementation, whereas in incubations with uRF, accumulation of trans-11-18:1 only occurred when DHA was added (6.40, 4.35, 1.06, and 3.91 for aRF, aRF+DHA, uRF, and uRF+DHA). The increased amounts of trans-11-18:1 were due to the strong inhibition of the reduction to 18:0 because no 18:0 was formed when trans-11-18:1 accumulated after 24 h. The results of the current experiment shows hydrogenation of trans-11, cis-15-18:2 occurred in the absence of in vitro DHA only, whereas substantial hydrogenation of trans-11-18:1 to 18:0 only took place in incubations without DHA and with unadapted rumen inoculum, confirming the higher sensitivity of the latter process to DHA.
    Journal of Dairy Science 04/2008; 91(3):1122-32. · 2.56 Impact Factor
  • Article: Effect of nylon bag and protozoa on in vitro corn starch disappearance.
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    ABSTRACT: An in vitro experiment was carried out to study whether the presence of protozoa in nylon bags can explain the underestimation of the in situ degradation of slowly degradable starch. Corn of a high (flint) and a low (dent) vitreousness variety was ground over a 3-mm screen, weighed in nylon bags with a pore size of 37 microm, and washed in cold water. Samples of washed cornstarch were incubated in 40-mL tubes with faunated and defaunated ruminal fluid. An additional amount of washed corn, in nylon bags, was inserted in each incubation tube. Incubations were carried out for 0, 2, 4, 6, 12, and 24 h, and starch residue in tube and nylon bag was determined. In general, starch disappearance from the nylon bag was less than from the tube, and was less with faunated than defaunated rumen fluid, but corn variety did not affect starch disappearance. When no protozoa were present, the disappearance of starch from the bags was higher after 6 and 12 h incubation compared with presence of protozoa. However, in the tubes, there was no difference in starch disappearance due to presence or absence of protozoa. Estimated lag time was higher in presence (4.6 h) then absence (3.6 h) of protozoa. It was concluded that the effect of presence or absence of protozoa on starch disappearance differs within or outside nylon bags. The reduced disappearance rate of starch inside the nylon bags in the presence of protozoa helps to explain the underestimation of starch degradation based on the in sacco procedure when compared with in vivo data upon incubation of slowly degradable starch sources.
    Journal of Dairy Science 04/2008; 91(3):1133-9. · 2.56 Impact Factor
  • Article: Aspects of rumen microbiology central to mechanistic modelling of methane production in cattle
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    ABSTRACT: Methane, in addition to being a significant source of energy loss to the animal that can range from 0·02 to 0·12 of gross energy intake, is one of the major greenhouse gases being targeted for reduction by the Kyoto protocol. Thus, one of the focuses of recent research in animal science has been to develop or improve existing methane prediction models in order to increase overall understanding of the system and to evaluate mitigation strategies for methane reduction. Several dynamic mechanistic models of rumen function have been developed which contain hydrogen gas balance sub-models from which methane production can be predicted. These models predict methane production with varying levels of success and in many cases could benefit from further development. Central to methane prediction is accurate volatile fatty acid prediction, representation of the competition for substrate usage within the rumen, as well as descriptions of protozoal dynamics and pH. Most methane models could also largely benefit from an expanded description of lipid metabolism and hindgut fermentation. The purpose of the current review is to identify key aspects of rumen microbiology that could be incorporated into, or have improved representation within, a model of ruminant digestion and environmental emissions.
    The Journal of Agricultural Science 03/2008; 146(02):213 - 233. · 2.04 Impact Factor
  • Article: Natural antibodies related to energy balance in early lactation dairy cows.
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    ABSTRACT: The objectives of this study were to determine the presence of natural antibodies (NAb) in plasma and milk of individual dairy cows and to study the relation between NAb concentrations and energy balance (EB) and dietary energy source. Cows (n = 76) were fed a mainly glucogenic, lipogenic, or a mixture of both diets (50:50 dry matter basis) from wk 3 before the expected calving date until wk 9 postpartum. Diets were isocaloric (net energy basis) and equal in intestinal digestible protein. Blood and milk were sampled weekly. Liver biopsies were taken in wk -2, 2, 4, and 6 relative to calving. Data are expressed as LSM +/- SEM. The NAb titers are expressed as the (2)log values of the highest dilution giving a positive reaction. The NAb concentration in plasma binding either keyhole limpet hemocyanin (KLH) or Escherichia coli lipopolysaccharide (LPS) increased with parity. The NAb concentration binding KLH was greater for cows fed the glucogenic diet (9.63 +/- 0.08) compared with the lipogenic diet (9.26 +/- 0.08). In milk, cows fed the glucogenic diet had smaller NAb concentrations binding KLH (3.98 +/- 0.18) and LPS (2.88 +/- 0.17) compared with cows fed the mixed diet (KLH: 4.93 +/- 0.18; LPS: 3.70 +/- 0.17). The NAb concentration in plasma had a positive relation with energy balance variables: EB, dry matter intake, milk yield, and plasma cholesterol, whereas NAb concentration in milk had a negative relation with energy balance variables: EB, dry matter intake, and plasma cholesterol. Additionally, NAb concentrations in milk had a positive relation with plasma nonesterified fatty acid concentration and milk fat and protein percentage. There was a tendency for a positive relation of NAb concentration binding LPS in plasma and somatic cell count in milk. No significant relations were detected between NAb concentrations in milk or plasma and plasma beta-hydroxybutyrate concentration and liver triacyl glyceride content. In conclusion, NAb are present in both milk and plasma of dairy cows peripartum and NAb concentrations increase with parity. Furthermore, our data indicate that a negative energy balance in dairy cows in early lactation can be associated with compromised innate immune function as indicated by decreased NAb concentration in plasma.
    Journal of Dairy Science 01/2008; 90(12):5490-8. · 2.56 Impact Factor

Institutions

  • 2011–2012
    • University of Guelph
      • Department of Animal and Poultry Science
      Guelph, Ontario, Canada
    • University of California, Davis
      • Department of Animal Science
      Davis, CA, USA
  • 1993–2011
    • Wageningen University
      • • Department of Animal Nutrition
      • • Department of Adaptation Physiology
      Wageningen, Provincie Gelderland, Netherlands
  • 2008–2009
    • Ghent University
      • Faculty of Bioscience Engineering
      Gent, VLG, Belgium
    • University of Manitoba
      • Department of Animal Science
      Winnipeg, Manitoba, Canada
  • 1999–2004
    • Universidad de León
      • Departamento de Producción Animal
      León, Castile and Leon, Spain
    • University of Reading
      • • School of Agriculture, Policy and Development
      • • Department of Agriculture
      Reading, ENG, United Kingdom