Article
NssR, a member of the Crp-Fnr superfamily from Campylobacter jejuni, regulates a nitrosative stress-responsive regulon that includes both a single-domain and a truncated haemoglobin.
School of Biomedical and Molecular Sciences, University of Surrey, Guildford GU2 7XH, UK.
Molecular Microbiology (impact factor:
5.01).
09/2005;
57(3):735-50.
DOI:10.1111/j.1365-2958.2005.04723.x
pp.735-50
Source: PubMed
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Citations (0)
- Cited In (1)
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Article: Dissimilatory metabolism of nitrogen oxides in bacteria: comparative reconstruction of transcriptional networks.
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ABSTRACT: Bacterial response to nitric oxide (NO) is of major importance since NO is an obligatory intermediate of the nitrogen cycle. Transcriptional regulation of the dissimilatory nitric oxides metabolism in bacteria is diverse and involves FNR-like transcription factors HcpR, DNR, and NnrR; two-component systems NarXL and NarQP; NO-responsive activator NorR; and nitrite-sensitive repressor NsrR. Using comparative genomics approaches, we predict DNA-binding motifs for these transcriptional factors and describe corresponding regulons in available bacterial genomes. Within the FNR family of regulators, we observed a correlation of two specificity-determining amino acids and contacting bases in corresponding DNA recognition motif. Highly conserved regulon HcpR for the hybrid cluster protein and some other redox enzymes is present in diverse anaerobic bacteria, including Clostridia, Thermotogales, and delta-proteobacteria. NnrR and DNR control denitrification in alpha- and beta-proteobacteria, respectively. Sigma-54-dependent NorR regulon found in some gamma- and beta-proteobacteria contains various enzymes involved in the NO detoxification. Repressor NsrR, which was previously known to control only nitrite reductase operon in Nitrosomonas spp., appears to be the master regulator of the nitric oxides' metabolism, not only in most gamma- and beta-proteobacteria (including well-studied species such as Escherichia coli), but also in gram-positive Bacillus and Streptomyces species. Positional analysis and comparison of regulatory regions of NO detoxification genes allows us to propose the candidate NsrR-binding motif. The most conserved member of the predicted NsrR regulon is the NO-detoxifying flavohemoglobin Hmp. In enterobacteria, the regulon also includes two nitrite-responsive loci, nipAB (hcp-hcr) and nipC (dnrN), thus confirming the identity of the effector, i.e. nitrite. The proposed NsrR regulons in Neisseria and some other species are extended to include denitrification genes. As the result, we demonstrate considerable interconnection between various nitrogen-oxides-responsive regulatory systems for the denitrification and NO detoxification genes and evolutionary plasticity of this transcriptional network.PLoS Computational Biology 11/2005; 1(5):e55. · 5.22 Impact Factor
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Keywords
cgb mutant
cis-acting motif mediates
complementing chromosomal insertion
confirmatory real-time polymerase chain reaction
controls nitrosative stress-responsive expression
Crp-Fnr superfamily member
Fnr-like binding sequence
food-borne pathogen
global gene expression
inducible cgb expression
major positive regulatory factor
major regulators
nitrosative stress
nitrosative stress-inducible expression
NO-related stress
NO-responsive components
novel NssR-dependent nitrosative stress-responsive regulon
transcription start point
unrecognized capacity
wild-type gene