Article

Lagrangian formulation with dissipation of Born-Oppenheimer molecular dynamics using the density-functional tight-binding method.

Department of Chemistry & Chemical Biology, Harvard University, Cambridge, Massachusetts 02138, USA.
The Journal of chemical physics (impact factor: 3.09). 07/2011; 135(4):044122. DOI:10.1063/1.3605303 pp.044122
Source: PubMed

ABSTRACT An important element determining the time requirements of Born-Oppenheimer molecular dynamics (BOMD) is the convergence rate of the self-consistent solution of Roothaan equations (SCF). We show here that improved convergence and dynamics stability can be achieved by use of a Lagrangian formalism of BOMD with dissipation (DXL-BOMD). In the DXL-BOMD algorithm, an auxiliary electronic variable (e.g., the electron density or Fock matrix) is propagated and a dissipative force is added in the propagation to maintain the stability of the dynamics. Implementation of the approach in the self-consistent charge density functional tight-binding method makes possible simulations that are several hundred picoseconds in lengths, in contrast to earlier DFT-based BOMD calculations, which have been limited to tens of picoseconds or less. The increase in the simulation time results in a more meaningful evaluation of the DXL-BOMD method. A comparison is made of the number of iterations (and time) required for convergence of the SCF with DXL-BOMD and a standard method (starting with a zero charge guess for all atoms at each step), which gives accurate propagation with reasonable SCF convergence criteria. From tests using NVE simulations of C(2)F(4) and 20 neutral amino acid molecules in the gas phase, it is found that DXL-BOMD can improve SCF convergence by up to a factor of two over the standard method. Corresponding results are obtained in simulations of 32 water molecules in a periodic box. Linear response theory is used to analyze the relationship between the energy drift and the correlation of geometry propagation errors.

0 0
 · 
1 Bookmark
 · 
39 Views

Keywords

32 water molecules
 
auxiliary electronic variable
 
Born-Oppenheimer molecular dynamics
 
convergence rate
 
DFT-based BOMD calculations
 
DXL-BOMD algorithm
 
DXL-BOMD method
 
energy drift
 
gives accurate propagation
 
improved convergence
 
Linear response theory
 
NVE simulations
 
periodic box
 
possible simulations
 
reasonable SCF convergence criteria
 
SCF convergence
 
self-consistent charge density functional tight-binding method
 
standard method
 
time requirements
 
zero charge