Article
Differential involvement of phosphoinositide 3-kinase in gonadotrophin-releasing hormone actions in gonadotrophs and somatotrophs of goldfish, Carassius auratus.
Department of Biological Sciences, University of Alberta, Edmonton, Alberta, Canada.
Journal of Neuroendocrinology (impact factor:
3.14).
06/2011;
23(8):660-74.
DOI:10.1111/j.1365-2826.2011.02172.x
pp.660-74
Source: PubMed
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Citations (0)
- Cited In (2)
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Article: Analysis of Genome Survey Sequences and SSR MarkerDevelopment for Siamese Mud Carp, Henicorhynchus siamensis,Using 454 Pyrosequencing
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ABSTRACT: Siamese mud carp (Henichorynchus siamensis) is a freshwater teleost of high economic importance in the Mekong River Basin. However, genetic data relevant for delineating wild stocks for management purposes currently are limited for this species. Here, we used 454 pyrosequencing to generate a partial genome survey sequence (GSS) dataset to develop simple sequence repeat (SSR) markers from H. siamensis genomic DNA. Data generated included a total of 65,954 sequence reads with average length of 264 nucleotides, of which 2.79% contain SSR motifs. Based on GSS-BLASTx results, 10.5% of contigs and 8.1% singletons possessed significant similarity (E value < 10–5) with the majority matching well to reported fish sequences. KEGG analysis identified several metabolic pathways that provide insights into specific potential roles and functions of sequences involved in molecular processes in H. siamensis. Top protein domains detected included reverse transcriptase and the top putative functional transcript identified was an ORF2-encoded protein. One thousand eight hundred and thirty seven sequences containing SSR motifs were identified, of which 422 qualified for primer design and eight polymorphic loci have been tested with average observed and expected heterozygosity estimated at 0.75 and 0.83, respectively. Regardless of their relative levels of polymorphism and heterozygosity, microsatellite loci developed here are suitable for further population genetic studies in H. siamensis and may also be applicable to other related taxa.International Journal of Molecular Sciences 09/2012; 13:10807-10827. · 2.60 Impact Factor -
Article: Analysis of Genome Survey Sequences and SSR Marker Development for Siamese Mud Carp, Henicorhynchus siamensis, Using 454 Pyrosequencing
[show abstract] [hide abstract]
ABSTRACT: Siamese mud carp (Henichorynchus siamensis) is a freshwater teleost of high economic importance in the Mekong River Basin. However, genetic data relevant for delineating wild stocks for management purposes currently are limited for this species. Here, we used 454 pyrosequencing to generate a partial genome survey sequence (GSS) dataset to develop simple sequence repeat (SSR) markers from H. siamensis genomic DNA. Data generated included a total of 65,954 sequence reads with average length of 264 nucleotides, of which 2.79% contain SSR motifs. Based on GSS-BLASTx results, 10.5% of contigs and 8.1% singletons possessed significant similarity (E value < 10 –5) with the majority matching well to reported fish sequences. KEGG analysis identified several metabolic pathways that provide insights into specific potential roles and functions of sequences involved in molecular processes in H. siamensis. Top protein domains detected included reverse transcriptase and the top putative functional transcript identified was an ORF2-encoded protein. One thousand eight hundred and thirty seven sequences containing SSR motifs were identified, of which 422 qualified for primer design and eight polymorphic loci have been tested with average observed and expected heterozygosity estimated at 0.75 and 0.83, respectively. Regardless of their relative levels of polymorphism and heterozygosity, microsatellite loci developed here are suitable for OPEN ACCESS Int. J. Mol. Sci. 2012, 13 10808 further population genetic studies in H. siamensis and may also be applicable to other related taxa.International Journal of Molecular Sciences 09/2012; 13:10807-10827. · 2.60 Impact Factor
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Keywords
c)GnRH-II] control maturational gonadotrophin-II [lutenising hormone
Ca(2+)-dependent intracellular signalling pathways
cGnRH-II-elicited LH release responses
class IA PI3Ks
endogenous GnRH isoforms
endogenous gonadotrophin-releasing hormones
excised pituitary fragments
GH secretion
GnRH isoform-specific effects
GnRH-evoked LH
GnRH-induced LH
goldfish gonadotrophs
goldfish pituitary tissue
growth hormone
Immunoreactive PI3K p85α
inhibitory action
PI3K inhibitors wortmannin
pituitary cells
predominant regulatory subunit
releasable hormone pool