Article
miR396-targeted AtGRF transcription factors are required for coordination of cell division and differentiation during leaf development in Arabidopsis.
National Laboratory of Plant Molecular Genetics, Shanghai Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China.
Journal of Experimental Botany (impact factor:
5.36).
10/2010;
62(2):761-73.
DOI:10.1093/jxb/erq307
pp.761-73
Source: PubMed
-
Citations (0)
- Cited In (2)
-
Dataset: 1471-2229-13-10
-
Article: Genome-wide identification of alternate bearing-associated microRNAs (miRNAs) in olive (Olea europaea L.)
[show abstract] [hide abstract]
ABSTRACT: Genome-wide identification of alternate bearing-associated microRNAs (miRNAs) in olive (Olea europaea L.) Abstract Background: Alternate bearing is a widespread phenomenon among crop plants, defined as the tendency of certain fruit trees to produce a high-yield crop one year ("on-year"), followed by a low-yield or even no crop the following year ("off-year"). Several factors may affect the balance between such developmental phase-transition processes. Among them are the microRNA (miRNA), being gene-expression regulators that have been found to be involved as key determinants in several physiological processes. Results: Six olive (Olea europaea L. cv. Ayvalik variety) small RNA libraries were constructed from fruits (ripe and unripe) and leaves ("on year" and "off year" leaves in July and in November, respectively) and sequenced by high-throughput Illumina sequencing. The RNA was retrotranscribed and sequenced using the high-throughput Illumina platform. Bioinformatics analyses of 93,526,915 reads identified 135 conserved miRNA, belonging to 22 miRNA families in the olive. In addition, 38 putative novel miRNAs were discovered in the datasets. Expression of olive tree miRNAs varied greatly among the six libraries, indicating the contribution of diverse miRNA in balancing between reproductive and vegetative phases. Predicted targets of miRNA were categorized into 108 process ontology groups with significance abundance. Among those, potential alternate bearing-associated processes were found, such as development, hormone-mediated signaling and organ morphogenesis. The KEGG analyses revealed that the miRNA-targeted genes are involved in seven main pathways, belonging to carbohydrate metabolism and hormone signal-transduction pathways. Conclusion: A comprehensive study on olive miRNA related to alternate bearing was performed. Regulation of miRNA under different developmental phases and tissues indicated that control of nutrition and hormone, together with flowering processes had a noteworthy impact on the olive tree alternate bearing. Our results also provide significant data on the miRNA-fruit development interaction and advance perspectives in the miRNA profile of the olive tree.BMC Plant Biology 01/2013; 10(13). · 3.45 Impact Factor
Data provided are for informational purposes only. Although carefully collected, accuracy cannot be guaranteed.
The impact factor represents a rough estimation of the journal's impact factor and does not reflect the actual
current impact factor.
Publisher conditions are provided by RoMEO. Differing provisions from the publisher's actual policy or licence
agreement may be applicable.
Keywords
adaxial-abaxial axis
cell cycle regulation
cell cycle-related genes
cell division
cell division activity
cell proliferation
higher ploidy level
increased percentage
leaf adaxial-abaxial defects
leaf adaxial-abaxial polarity
leaf cells
leaf morphogenesis
leaf polarity mutants asymmetric leaves1
miR396)-targeted Arabidopsis growth-regulating factors
mitotic cell cycle
plants
polarized cell differentiation
temporal-spatial relationships
transgenic miR396 overexpression
two processes