Article

Identification of NPPA variants associated with atrial fibrillation in a Chinese GeneID population.

Center for Human Genome Research, Cardio-X Institute, Huazhong University of Science and Technology, Wuhan, PR China.
Clinica chimica acta; international journal of clinical chemistry (impact factor: 2.54). 04/2010; 411(7-8):481-5. DOI:10.1016/j.cca.2009.12.019 pp.481-5
Source: PubMed

ABSTRACT A frameshift mutation in the NPPA gene was identified in 1 family with atrial fibrillation (AF), however, further studies are needed to establish unequivocally the genetic association between NPPA and AF.
A case control association study and mutational analysis of NPPA were performed with 384 sporadic AF patients and 844 controls from a Chinese GeneID population. Genotyping was performed using High-Resolution Melt analysis. Mutational analysis was performed using direct DNA sequencing analysis.
Significant allelic association was detected between single nucleotide polymorphism (SNP) rs5063 and lone AF (p=0.015, OR=1.63; adjusted p=0.003). Genotypic association was significant assuming an additive or dominant model (adjusted p=0.005 and 0.007, respectively). Six new variants were identified in NPPA, including 2 in the 5'-UTR, 2 in the 3'-UTR, and 2 missense substitutions. Variants c.413T>C, c.*48G>A and c.*133G>T were not present in 844 controls, and the others were identified in controls.
Variants in NPPA confer risk of lone AF in a Chinese population. Thus, in addition to being a disease-causing gene with mutations identified in familial AF cases, NPPA is a susceptibility gene for lone AF.

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Keywords

1 family
 
2 missense substitutions
 
384 sporadic AF patients
 
atrial fibrillation
 
case control association study
 
Chinese GeneID population
 
Chinese population
 
direct DNA sequencing analysis
 
disease-causing gene
 
dominant model
 
familial AF cases
 
frameshift mutation
 
genetic association
 
High-Resolution Melt analysis
 
lone AF
 
new variants
 
NPPA gene
 
Significant allelic association
 
single nucleotide polymorphism
 
susceptibility gene