Article
Visualization of cargo concentration by COPII minimal machinery in a planar lipid membrane.
Department of Biomolecular Energetics, The Institute of Scientific and Industrial Research, Osaka University, Ibaraki, Osaka, Japan.
The EMBO Journal (impact factor:
9.2).
09/2009;
28(21):3279-89.
DOI:10.1038/emboj.2009.269
pp.3279-89
Source: PubMed
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Article: Hierarchical global optimization of quasiseparable systems: application to Lennard-Jones clusters.
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ABSTRACT: An unbiased hierarchical global optimization (GO) method for quasiseparable systems is presented. In such systems the coordinates of a set of nearby local minima approximately describe the coordinates of a much larger set of surrounding local minima. This allows one to reduce the original GO problem to a much simpler GO subproblem that uses the coordinates of the local minima to reduce the search space and simplify its landscape. The algorithm showed excellent performance in tests on "difficult cases" of Lennard-Jones (LJ) clusters. Putative global minima of LJ500 and LJ1000 are obtained.Physical Review E 09/2002; 66(2 Pt 2):025701. · 2.26 Impact Factor
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Keywords
artificial planar lipid bilayer
cargo clusters
cargo concentration
clusters
complete COPII mixture
continuous GTPase cycles
COPII vesicle buds
COPII vesicle formation
COPII vesicles
dynamics
fluorescent spots
fluorescently labelled cargo
minimal
non-cargo proteins
planar membrane
Sar1p-Sec23/24p-cargo complex
Sec13/31p recruitment
Selective protein export
vesicle release