Article
Correlation between hemichrome stability and the root effect in tetrameric hemoglobins.
Department of Chemistry, University of Naples Federico II, Complesso Universitario Monte S. Angelo, Naples, Italy.
Biophysical Journal (impact factor:
3.65).
09/2009;
97(3):866-74.
DOI:10.1016/j.bpj.2009.04.056
pp.866-74
Source: PubMed
- Citations (2)
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Cited In (0)
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Article: Hemoglobin structure/function and globin-gene evolution in the Arctic fish Liparis tunicatus.
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ABSTRACT: The importance of the Arctic, in contributing to the knowledge of the overall ensemble of adaptive processes influencing the evolution of marine organisms, calls for investigations on molecular adaptations in Arctic fish. Unlike the vast majority of Antarctic Notothenioidei, several Arctic species display high hemoglobin multiplicity. The blood of four species, the spotted wolffish of the family Anarhichadidae and three Gadidae, contains three functionally distinct major components. Similar to many Antarctic notothenioids, Arctic Liparis tunicatus (suborder Cottoidei, family Liparidae) has one major hemoglobin (Hb 1) accompanied by a minor component (Hb 2). This paper reports the structural and functional characterisation of Hb 1 of L. tunicatus. This hemoglobin shows low oxygen affinity, and pronounced Bohr and Root effects. The amino-acid sequence of the beta chain displays an unusual substitution in NA2 (beta2) at the phosphate-binding site, and the replacement of Val E11 (beta67) with Ile. Similar to some Antarctic fish Hbs, electron paramagnetic resonance spectra reveal the formation of a ferric penta-coordinated species even at physiological pH. The amino-acid sequences have also been used to gain insight into the evolutionary history of globins of polar fish. L. tunicatus globins appear close to the notothenioid clades as predicted by teleostean phylogenies. Close phylogenetic relationships between Cottoidei and Notothenioidei, together with their life style, seem to be the main factor driving the globin-sequence evolution.Gene 01/2008; 406(1-2):58-68. · 2.34 Impact Factor -
Article: The influence of X-rays on the structural studies of peroxide-derived myoglobin intermediates.
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ABSTRACT: In recent years, the awareness of potential radiation damage of metal centers in protein crystals during crystallographic data collection has received increasing attention. The radiation damage can lead to radiation-induced changes and reduction of the metal sites. One of the research fields where these concerns have been comprehensively addressed is the study of the reaction intermediates of the heme peroxidase and oxygenase reaction cycles. For both the resting states and the high-valent intermediates, the X-rays used in the structure determination have given undesired side effects through radiation-induced changes to the trapped intermediates. However, X-rays have been used to generate and trap the peroxy/hydroperoxy state in crystals. In this review, the structural work and the influence of X-rays on these intermediates in myoglobin are summarized and viewed in light of analogous studies on similar intermediates in peroxidases and oxygenases.Chemistry & Biodiversity 11/2008; 5(10):2067-89. · 1.80 Impact Factor
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Keywords
5C state
aquomet form
combined EPR/x-ray crystallography study
different forms
EPR analysis
ferric tetrameric Hbs
Hbs
hemichromes coexist
high-Antarctic notothenioid fishes Trematomus bernacchii
monomeric Hbs
partial hemichrome state
physiological functions
Root effect
Root-effect Hb
sub-Antarctic notothenioid Cottoperca gobio
T quaternary structure
T. bernacchii
temperate fish Hbs
tetrameric Hbs
three Hbs