Article

Catalytic core of a membrane-associated eukaryotic polyphosphate polymerase.

European Molecular Biology Laboratory, Structural and Computational Biology Unit, Meyerhofstrasse 1, 69117 Heidelberg, Germany.
Science (impact factor: 31.2). 05/2009; 324(5926):513-6. DOI:10.1126/science.1168120 pp.513-6
Source: PubMed

ABSTRACT Polyphosphate (polyP) occurs ubiquitously in cells, but its functions are poorly understood and its synthesis has only been characterized in bacteria. Using x-ray crystallography, we identified a eukaryotic polyphosphate polymerase within the membrane-integral vacuolar transporter chaperone (VTC) complex. A 2.6 angstrom crystal structure of the catalytic domain grown in the presence of adenosine triphosphate (ATP) reveals polyP winding through a tunnel-shaped pocket. Nucleotide- and phosphate-bound structures suggest that the enzyme functions by metal-assisted cleavage of the ATP gamma-phosphate, which is then in-line transferred to an acceptor phosphate to form polyP chains. Mutational analysis of the transmembrane domain indicates that VTC may integrate cytoplasmic polymer synthesis with polyP membrane translocation. Identification of the polyP-synthesizing enzyme opens the way to determine the functions of polyP in lower eukaryotes.

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Keywords

2.6 angstrom crystal structure
 
acceptor phosphate
 
adenosine triphosphate
 
ATP gamma-phosphate
 
catalytic domain
 
cytoplasmic polymer synthesis
 
eukaryotic polyphosphate polymerase
 
form polyP chains
 
lower eukaryotes
 
membrane-integral vacuolar transporter chaperone
 
metal-assisted cleavage
 
Mutational analysis
 
Nucleotide-
 
phosphate-bound structures
 
polyP
 
polyP membrane translocation
 
polyP-synthesizing enzyme
 
Polyphosphate
 
transmembrane domain
 
x-ray crystallography