Article

Pelagibius litoralis gen. nov., sp. nov., a marine bacterium in the family Rhodospirillaceae isolated from coastal seawater.

Open and Tropical Ocean Research Division, Korea Ocean Research and Development Institute, Ansan 426-744, Republic of Korea.
International journal of systematic and evolutionary microbiology (impact factor: 2.27). 05/2009; 59(Pt 4):818-23. DOI:10.1099/ijs.0.002774-0 pp.818-23
Source: PubMed

ABSTRACT A Gram-negative, strictly aerobic, slightly curved rod-shaped bacterial strain, designated CL-UU02(T), was isolated from coastal seawater off the east coast of Korea. 16S rRNA gene sequence analysis revealed a clear affiliation of this novel strain with the family Rhodospirillaceae. Strain CL-UU02(T) formed a robust cluster with the type strains of species of the genus Rhodovibrio at 16S rRNA gene sequence similarity levels of 89.9-90.4 %. Strain CL-UU02(T) shared no more than 89 % 16S rRNA gene sequence similarity with the type strains of other species in the family Rhodospirillaceae. Strain CL-UU02(T) was able to grow in the presence of 2-6 % sea salts, and grew optimally at 28-30 degrees C and pH 7-8. The DNA G+C content of strain CL-UU02(T) was 66.3 mol%. On the basis of phylogenetic analyses and chemotaxonomic and physiological data, strain CL-UU02(T) is considered to represent a novel species of a new genus in the family Rhodospirillaceae, for which the name Pelagibius litoralis gen. nov., sp. nov. is proposed. The type strain of Pelagibius litoralis is CL-UU02(T) (=KCCM 42323(T)=JCM 15426(T)).

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Keywords

16S rRNA gene sequence analysis
 
16S rRNA gene sequence similarity levels
 
2-6 % sea salts
 
89 % 16S rRNA gene sequence similarity
 
coastal seawater
 
curved rod-shaped bacterial strain
 
DNA G+C content
 
family Rhodospirillaceae
 
genus Rhodovibrio
 
name Pelagibius litoralis gen
 
new genus
 
nov
 
novel species
 
novel strain
 
phylogenetic analyses
 
physiological data
 
robust cluster
 
Strain CL-UU02(T)
 
type strain
 
type strains
 

Dong Han Choi