Article
Parasitic chytrids: their effects on phytoplankton communities and food-web dynamics
Toho University Department of Environmental Science, Faculty of Science Miyama 2-2-1 Funabashi 274-8510 Japan
Hydrobiologia (impact factor:
1.78).
04/2012;
578(1):113-129.
DOI:10.1007/s10750-006-0438-z
pp.113-129
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Citations (0)
- Cited In (5)
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Article: High-coverage ITS primers for the DNA-based identification of ascomycetes and basidiomycetes in environmental samples.
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ABSTRACT: The kingdom Fungi is estimated to include 1.5 million or more species, playing key roles as decomposers, mutualists, and parasites in every biome on the earth. To comprehensively understand the diversity and ecology of this huge kingdom, DNA barcoding targeting the internal transcribed spacer (ITS) region of the nuclear ribosomal repeat has been regarded as a prerequisite procedure. By extensively surveying ITS sequences in public databases, we designed new ITS primers with improved coverage across diverse taxonomic groups of fungi compared to existing primers. An in silico analysis based on public sequence databases indicated that the newly designed primers matched 99% of ascomycete and basidiomycete ITS taxa (species, subspecies or varieties), causing little taxonomic bias toward either fungal group. Two of the newly designed primers could inhibit the amplification of plant sequences and would enable the selective investigation of fungal communities in mycorrhizal associations, soil, and other types of environmental samples. Optimal PCR conditions for the primers were explored in an in vitro investigation. The new primers developed in this study will provide a basis for ecological studies on the diversity and community structures of fungi in the era of massive DNA sequencing.PLoS ONE 01/2012; 7(7):e40863. · 4.09 Impact Factor -
Article: Functional Effects of Parasites on Food Web Properties during the Spring Diatom Bloom in Lake Pavin: A Linear Inverse Modeling Analysis
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ABSTRACT: This study is the first assessment of the quantitative impact of parasitic chytrids on a planktonic food web. We used a carbon-based food web model of Lake Pavin (Massif Central, France) to investigate the effects of chytrids during the spring diatom bloom by developing models with and without chytrids. Linear inverse modelling procedures were employed to estimate undetermined flows in the lake. The Monte Carlo Markov chain linear inverse modelling procedure provided estimates of the ranges of model-derived fluxes. Model results support recent theories on the probable impact of parasites on food web function. In the lake, during spring, when 'inedible' algae (unexploited by planktonic herbivores) were the dominant primary producers, the epidemic growth of chytrids significantly reduced the sedimentation loss of algal carbon to the detritus pool through the production of grazer-exploitable zoospores. We also review some theories about the potential influence of parasites on ecological network properties and argue that parasitism contributes to longer carbon path lengths, higher levels of activity and specialization, and lower recycling. Considering the ''structural asymmetry'' hypothesis as a stabilizing pattern, chytrids should contribute to the stability of aquatic food webs.PLoS ONE 01/2011; 6. · 4.09 Impact Factor -
Article: Fungal Parasitism: Life Cycle, Dynamics and Impact on Cyanobacterial Blooms.
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ABSTRACT: Many species of phytoplankton are susceptible to parasitism by fungi from the phylum Chytridiomycota (i.e. chytrids). However, few studies have reported the effects of fungal parasites on filamentous cyanobacterial blooms. To investigate the missing components of bloom ecosystems, we examined an entire field bloom of the cyanobacterium Anabaena macrospora for evidence of chytrid infection in a productive freshwater lake, using a high resolution sampling strategy. A. macrospora was infected by two species of the genus Rhizosiphon which have similar life cycles but differed in their infective regimes depending on the cellular niches offered by their host. R. crassum infected both vegetative cells and akinetes while R. akinetum infected only akinetes. A tentative reconstruction of the developmental stages suggested that the life cycle of R. crassum was completed in about 3 days. The infection affected 6% of total cells (and 4% of akinètes), spread over a maximum of 17% of the filaments of cyanobacteria, in which 60% of the cells could be parasitized. Furthermore, chytrids may reduce the length of filaments of Anabaena macrospora significantly by "mechanistic fragmentation" following infection. All these results suggest that chytrid parasitism is one of the driving factors involved in the decline of a cyanobacteria blooms, by direct mortality of parasitized cells and indirectly by the mechanistic fragmentation, which could weaken the resistance of A. macrospora to grazing.PLoS ONE 01/2013; 8(4):e60894. · 4.09 Impact Factor
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Keywords
algal hosts
chytrids
chytrids epidemics
coevolution
environmental factors
established culturing methods
fungal parasitism
genetic diversity
host growth support epidemic development
host specificity
host-specific parasites
hypersensitivity response
larger host cells
molecular science offer good potential
multitrophic indirect defenses
others report epidemics
parasitize phytoplankton species
phytoplankton species
progression
zooplankton grazing