Article
Molecular characterization ofArabidopsisPHO80-like proteins, a novel class of CDKA;1-interacting cyclins
Cellular and Molecular Life Sciences CMLS (impact factor:
6.57).
05/2004;
61(12):1485-1497.
DOI:10.1007/s00018-004-4057-4
pp.1485-1497
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Citations (0)
- Cited In (2)
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Article: A cotton-fiber-associated cyclin-dependent kinase a gene: characterization and chromosomal location.
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ABSTRACT: A cotton fiber cDNA and its genomic sequences encoding an A-type cyclin-dependent kinase (GhCDKA) were cloned and characterized. The encoded GhCDKA protein contains the conserved cyclin-binding, ATP binding, and catalytic domains. Northern blot and RT-PCR analysis revealed that the GhCDKA transcript was high in 5-10 DPA fibers, moderate in 15 and 20 DPA fibers and roots, and low in flowers and leaves. GhCDKA protein levels in fibers increased from 5-15 DPA, peaked at 15 DPA, and decreased from 15 t0 20 DPA. The differential expression of GhCDKA suggested that the gene might play an important role in fiber development. The GhCDKA sequence data was used to develop single nucleotide polymorphism (SNP) markers specific for the CDKA gene in cotton. A primer specific to one of the SNPs was used to locate the CDKA gene to chromosome 16 by deletion analysis using a series of hypoaneuploid interspecific hybrids.International Journal of Plant Genomics 01/2012; 2012:613812. -
Article: Genome-wide analysis of the diatom cell cycle unveils a novel type of cyclins involved in environmental signaling.
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ABSTRACT: Despite the enormous importance of diatoms in aquatic ecosystems and their broad industrial potential, little is known about their life cycle control. Diatoms typically inhabit rapidly changing and unstable environments, suggesting that cell cycle regulation in diatoms must have evolved to adequately integrate various environmental signals. The recent genome sequencing of Thalassiosira pseudonana and Phaeodactylum tricornutum allows us to explore the molecular conservation of cell cycle regulation in diatoms. By profile-based annotation of cell cycle genes, counterparts of conserved as well as new regulators were identified in T. pseudonana and P. tricornutum. In particular, the cyclin gene family was found to be expanded extensively compared to that of other eukaryotes and a novel type of cyclins was discovered, the diatom-specific cyclins. We established a synchronization method for P. tricornutum that enabled assignment of the different annotated genes to specific cell cycle phase transitions. The diatom-specific cyclins are predominantly expressed at the G1-to-S transition and some respond to phosphate availability, hinting at a role in connecting cell division to environmental stimuli. The discovery of highly conserved and new cell cycle regulators suggests the evolution of unique control mechanisms for diatom cell division, probably contributing to their ability to adapt and survive under highly fluctuating environmental conditions.Genome biology 02/2010; 11(2):R17. · 6.63 Impact Factor
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Keywords
100 amino acids
34 cyclin genes
co-immunoprecipitation experiments
conserved central region
control progression
corresponding region
cyclin box
cyclin-dependent kinases
CYCPs interact preferentially
mature tissues
novel class
nutritional status
P-type cyclins
PHO80 cyclin
pho80 mutant strain
phosphate-dependent expression
possible role
related G1 cyclins
Trypanosoma cruzi
yeast two-hybrid analysis