Article
Roles of the mammalian target of rapamycin, mTOR, in controlling ribosome biogenesis and protein synthesis.
School of Biological Sciences, Life Sciences Building, Highfield Campus, University of Southampton, Southampton SO17 1BJ, UK.
Biochemical Society Transactions (impact factor:
3.71).
02/2012;
40(1):168-72.
DOI:10.1042/BST20110682
pp.168-72
Source: PubMed
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Citations (0)
- Cited In (2)
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Article: Molecular networks of human muscle adaptation to exercise and age.
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ABSTRACT: Physical activity and molecular ageing presumably interact to precipitate musculoskeletal decline in humans with age. Herein, we have delineated molecular networks for these two major components of sarcopenic risk using multiple independent clinical cohorts. We generated genome-wide transcript profiles from individuals (n = 44) who then undertook 20 weeks of supervised resistance-exercise training (RET). Expectedly, our subjects exhibited a marked range of hypertrophic responses (3% to +28%), and when applying Ingenuity Pathway Analysis (IPA) up-stream analysis to ∼580 genes that co-varied with gain in lean mass, we identified rapamycin (mTOR) signaling associating with growth (P = 1.4×10(-30)). Paradoxically, those displaying most hypertrophy exhibited an inhibited mTOR activation signature, including the striking down-regulation of 70 rRNAs. Differential analysis found networks mimicking developmental processes (activated all-trans-retinoic acid (ATRA, Z-score = 4.5; P = 6×10(-13)) and inhibited aryl-hydrocarbon receptor signaling (AhR, Z-score = -2.3; P = 3×10(-7))) with RET. Intriguingly, as ATRA and AhR gene-sets were also a feature of endurance exercise training (EET), they appear to represent "generic" physical activity responsive gene-networks. For age, we found that differential gene-expression methods do not produce consistent molecular differences between young versus old individuals. Instead, utilizing two independent cohorts (n = 45 and n = 52), with a continuum of subject ages (18-78 y), the first reproducible set of age-related transcripts in human muscle was identified. This analysis identified ∼500 genes highly enriched in post-transcriptional processes (P = 1×10(-6)) and with negligible links to the aforementioned generic exercise regulated gene-sets and some overlap with ribosomal genes. The RNA signatures from multiple compounds all targeting serotonin, DNA topoisomerase antagonism, and RXR activation were significantly related to the muscle age-related genes. Finally, a number of specific chromosomal loci, including 1q12 and 13q21, contributed by more than chance to the age-related gene list (P = 0.01-0.005), implying possible epigenetic events. We conclude that human muscle age-related molecular processes appear distinct from the processes regulated by those of physical activity.PLoS Genetics 03/2013; 9(3):e1003389. · 8.69 Impact Factor -
Article: Correction: Molecular Networks of Human Muscle Adaptation to Exercise and Age.
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ABSTRACT: [This corrects the article on p. e1003389 in vol. 9.].PLoS Genetics 04/2013; 9(4). · 8.69 Impact Factor
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Keywords
5'-terminal pyrimidine tract
anabolic metabolism
cell growth
cellular energy status
diverse signals
greater inhibition
growth factors
human cells
inhibiting mTOR kinase activity causes
limited impact
mammalian target
mRNAs encode ribosomal proteins
mTOR kinase inhibitors
Partial inhibition
protein synthesis
proteins encoded
pulsed stable-isotope-labelling technique
rapamycin complex 1
ribosome biogenesis
specific proteins