Article
Oxidation of Isopropylcyclopropane by Chromyl Chloride: Ring-Opened Products Support a Hydrogen Atom Abstraction Mechanism.
Department of Chemistry, Box 351700, University of Washington, Seattle, Washington 98195-1700.
The Journal of Organic Chemistry (impact factor:
4.45).
07/1997;
62(13):4248-4252.
pp.4248-4252
Source: PubMed
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Citations (0)
- Cited In (1)
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Article: 2'-fluoro-4'-thioarabino-modified oligonucleotides: conformational switches linked to siRNA activity.
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ABSTRACT: The synthesis of oligonucleotides containing 2'-deoxy-2'-fluoro-4'-thioarabinonucleotides is described. 2'-Deoxy-2'-fluoro-5-methyl-4'-thioarabinouridine (4'S-FMAU) was incorporated into 18-mer antisense oligonucleotides (AONs). 4'S-FMAU adopts a predominantly northern sugar conformation. Oligonucleotides containing 4'S-FMAU, unlike those containing FMAU, were unable to elicit E. coli or human RNase H activity, thus corroborating the hypothesis that RNase H prefers duplexes containing oligonucleotides that can adopt eastern conformations in the antisense strand. The duplex structure and stability of these oligonucleotides was also investigated via circular dichroism (CD)- and UV- binding studies. Replacement of the 4'-oxygen by a sulfur atom resulted in a marked decrease in melting temperature of AON:RNA as well as AON:DNA duplexes. 2'-deoxy-2'-fluoro-4'-thioarabinouridine (4'S-FAU) was incorporated into 21-mer small interfering RNA (siRNA) and the resulting siRNA molecules were able to trigger RNA interference with good efficiency. Positional effects were explored, and synergy with 2'F-ANA, which has been previously established as a functional siRNA modification, was demonstrated.Nucleic Acids Research 02/2007; 35(5):1441-51. · 8.03 Impact Factor
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Keywords
20 organic products
65 degrees C
Authentic samples
Chromyl chloride
cyclopropyl products
dark precipitate
expected ring-opened product
form 3
form organic radical intermediates
fragmentation patterns
gas phase
GC/MS data
hydrogen atom transfer
initial hydrogen atom abstraction
liquid phase reaction
neat isopropylcyclopropane
organic products
oxidized products
resulting dimethylcyclopropylcarbinyl radical
ring-opened products