Jaysankar De |
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PhD
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United Nations Educational, Scientific and Cultural Organization Chair in Life Sciences International Postgraduate Educational Center
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Biotechnology
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Skills (24)
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31 Questions4474 Followers
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11 Questions301 Followers
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44 Questions3717 Followers
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283 Questions9689 Followers
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69 Questions4516 Followers
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3 Questions13 Followers
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225 Questions11583 Followers
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39 Questions173 Followers
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23 Questions113 Followers
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32 Questions1574 Followers
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200 Questions4825 Followers
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34 Questions1774 Followers
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227 Questions42035 Followers
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312 Questions17369 Followers
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30 Questions1555 Followers
Research experience
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Sep 2012–
presentResearch: Biophysical properties of cell hydration and its use in environmental studies
UNESCO Chair-Life Sciences International Postgraduate Educational Center · BiotechnolgoyArmenia · YerevanELF EMF - induced modulation of ionizing radiation effect on germination of plant seeds -
May 2012
Research: Microbiological analyses for food chain risk assessment
Center for Ecological-Noosphere Studies, NAS, RA. · Informational and Analytical Center for Food Chain Risk Assessment · Food microbiologyArmenia · YerevanMicrobiological analyses of food products (milk, meat, etc) for quality assessment and control.... -
Oct 2009–
Mar 2011Research: Effect of solar radiation, and nitrate as photosensitizer on freshwater bacteria
Uppsala University · Limnology · Stefan Bertilsson's groupSweden · Uppsala -
Aug 2008–
Jun 2009Research: Subsurface uranium fate and transport: Integrated experiments and modeling of coupled biogeochemical mechanisms of nanocrystalline uraninite oxidation by Fe(III)-(hydr)oxides
South Dakota School of Mines and Technology · CBE · Rajesh Sani's groupUSA · Rapid City -
Nov 2005–
Nov 2007Research: Biogeochemistry and bioremediation of heavy metals in Uranouchi inlet, Kochi prefecture, Japan
Kochi University · GRAKUS · Kimio Fukami's groupJapan · Kochi -
Aug 2001–
Dec 2005Research: Mercury-resistant marine bacteria and their role in bioremediation of certain toxicants
National Institute of Oceanography-Goa · BOD · N. Ramaiah's groupIndia · GoaDoctoral research -
Dec 1998–
Sep 2002Research: Coastal Ocean Monitoring and Prediction System (COMAPS)
National Institute of Oceanography-Goa · BOD · N.Ramaiah's groupIndia · Goa -
Dec 1998–
Sep 2002Research: National Institute of Oceanography
National Institute of Oceanography · Biological OceanographyIndia · Goa
Education
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Aug 2001–
Dec 2005Goa University
Marine Science · PhDIndia · Goa -
Aug 1994–
Aug 1996University of Calcutta
Marine Science · M.Sc.India · Calcutta
Awards & achievements
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Oct 2012Grant: Travel grant from the National Foundation of Science and Advanced Technologies (NFSAT), Armenia
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May 2009Scholarship: SI (Swedish Institute, Sweden) -Guest Postdoctoral Fellowship
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Aug 2005Award: Financial support from the NIO to Talented Young Researcher for foreign visit
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Aug 2005Scholarship: JSPS (Japanese Society for the Promotion of Science, Japan) - Postdoctoral Research Fellowship
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Aug 2005Award: CSIR-Foreign Travel grant for Research Scholar
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Jan 2005Award: Indian Science Congress Association-Young Scientist (in Environmental Science section)
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Feb 2004Award: Best paper presentation award at the International Workshop on Marine Pollution and Ecotoxicology (WMPET)
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Oct 2003Award: Cash award from the NIO-Special Funds for the US patent no. 6544773
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Apr 2003Scholarship: UGC-DAAD (University Grants Commission - Deutscher Akademischer Austausch Dienst, Germany) - Fellowship
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Jul 2002Scholarship: CSIR (Council of Scientific and Industrial Research, India) - Senior Research Fellowship
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Feb 1998Scholarship: UGC (University Grants Commission, India) - Research Fellowship
Other
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LanguagesFluent - English, Bengali, Hindi
Intermediate - Armenian, Japanese -
Scientific MembershipsLife member: Indian Science Congress Association, Center for Coastal Zone Management, Kolkata, India
Member: World Scientific and Engineering Academy and Society (WSEAS), Association of Microbiologists of India, Bioremediation Discussion Group, OceanExpert, Oceanographers Net, The International Association for Ecology (INTECOL), Zoological Society of India, Kolkata, India, DAAD alumni club, Indian JSPS alumni club, SciLifeLab-Uppsala (Sweden), The Science Advisory Board (USA). -
Journal RefereesToxicological and Environmental Chemistry, Journal of hazardous materials, Chemical and Biochemical Engineering Quarterly, African Journal of Environmental Science and Technology, World Journal of Microbiology and Biotechnology, Ecological Indicators, Fisheries Science, African journal of microbiology research, Applied Microbiology and Biotechnology
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Other InterestsReading and discussing on and off-line, Listening to music, Playing Hawaiian guitar
Questions and Answers (62) View all
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Answer added in Bioassay, Ecotoxicology, Bioindicators3 Do PAHs have any acute effect on the human body?By Mehdi Zarei · Marine Science & Technology University of KhorramshahrJaysankar De · United Nations Educational, Scientific and Cultural Organization Chair in Life Sciences International Postgraduate Educational CenterThere are different effects from different PAH on human...Have a look at this link (http://www.atsdr.cdc.gov/csem/csem.asp?csem=13&po=11) and the innu... [more]There are different effects from different PAH on human...Have a look at this link (http://www.atsdr.cdc.gov/csem/csem.asp?csem=13&po=11) and the innumerable scientific papers available on the net...:-)Following
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Answer added in Biotechnology8 What is the molecular weight of bovine serum albuminBy Antony muthu prabhu · Annamalai UniversityJaysankar De · United Nations Educational, Scientific and Cultural Organization Chair in Life Sciences International Postgraduate Educational CenterMW of BSA is 66399 Da (Mass Spec grade)...Though it might slightly vary in between different manufacturers....Cheers...:-)MW of BSA is 66399 Da (Mass Spec grade)...Though it might slightly vary in between different manufacturers....Cheers...:-)Following
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Answer added in Contamination30 How to decontaminate pipettes?By Rosa P · University of FloridaJaysankar De · United Nations Educational, Scientific and Cultural Organization Chair in Life Sciences International Postgraduate Educational CenterI guess Maria meant UV....not to keep under UK...Or else that would be even bigger problem than getting false positive...:-)..U can even autoclave you... [more]I guess Maria meant UV....not to keep under UK...Or else that would be even bigger problem than getting false positive...:-)..U can even autoclave your pipettes if it is allowed (some pipettes can be autoclaved)....Good luck..:-)Following
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Answer added in Biochemical Engineering109 Is the relation between OD reading and cell concentration (cells/mL) of bacteria different in various culture media?By Hamed Khodadadi · Eastern Mediterranean UniversityJaysankar De · United Nations Educational, Scientific and Cultural Organization Chair in Life Sciences International Postgraduate Educational CenterMake new curve for every medium and strain. You can use your equation as a rough estimate to start with. Please also remember that OD vs Cell counts h... [more]Make new curve for every medium and strain. You can use your equation as a rough estimate to start with. Please also remember that OD vs Cell counts holds good upto log phase (before reaching the stationary phase) and they are not in linear relation from the midway of your growth curve. Remaining things are already told by other respected members. Good luck..:-)Following
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Answer added in Clinical Microbiology45 How to preserve ATCC bacterial strains for long time?By Ola Karmi · Augusta Victoria HospitalJaysankar De · United Nations Educational, Scientific and Cultural Organization Chair in Life Sciences International Postgraduate Educational CenterLyophilization is by far the best method I have used or come across until now. My own bacterial culture (related to a US patent) is preserved lyophili... [more]Lyophilization is by far the best method I have used or come across until now. My own bacterial culture (related to a US patent) is preserved lyophilized. I prefer this over other methods since it is easy to use and revive culture for regular/intermittent use. You can otherwise consider Dr. Patel's (and also some others) suggestion on using glycerol stock-cryo preservation after making sure that your culture comes from the log phase (grow you liquid cultures and plate them to find out the exact timing of this log phase that you want to use your culture from). However, for regular use it is preferable to use frequent sub-culturing method. You can once in a while check for the purity of your bacterium by using your cryo-preserved stock as a reference. Good luck..:-)Following
Publications (14) View all
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Article: Bioremediation of toxic substances by mercury resistant marine bacteria.
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ABSTRACT: Bioremediation of toxic substances includes microbe-mediated enzymatic transformation of toxicants to non-toxic, often assimilable, forms. Mercury-resistant marine bacteria are found to be very promising in dealing with mercury, and a host of other highly toxic heavy metals and xenobiotics. In the present studies we have shown that the Pseudomonas aeruginosa CH07 (NRRL B-30604) has been able to degrade a variety of PCB congeners including a complete degradation of CB-126 and CB-181. The culture was able to remove over 70% Cd from growth medium when supplemented with 100 ppm Cd. The same bacterium rapidly biotransformed/removed toxic mercury from wastewater in a bioreactor system.Ecotoxicology 06/2006; 15(4):385-9. · 2.36 Impact Factor -
SourceAvailable from: Jaysankar De
Article: Aerobic degradation of highly chlorinated polychlorobiphenyls by a marine bacterium, Pseudomonas CH07
Jaysankar De, N. Ramaiah, A. Sarkar[show abstract] [hide abstract]
ABSTRACT: Hitherto, aerobic degradation of polychlorinated biphenyls (PCBs) has been reported to be limited to the less chlorinated biphenyls. We report here a marine mercury-resistant bacterium, Pseudomonas CH07 (NRRL B-30604) which was capable of degrading a variety of highly chlorinated congeners of PCBs from the technical mixture Clophen A-50. Of the two most toxic coplanar PCBs present in Clophen A-50, one coplanar pentachloro congener CB-126 and one toxic sterically hindered heptachloro congener CB-181 were found to be degraded completely and the other coplanar tetrachloro congener CB-77 was degraded by more than 40% within 40 h by this microorganism. The apparent absence of bphC in this bacterium leads to the proposal of a different mechanism for degradation of PCBs.World Journal of Microbiology and Biotechnology 01/2006; 22(12):1321-1327. · 1.53 Impact Factor -
SourceAvailable from: Jaysankar De
Conference Proceeding: HEAVY METAL ACCUMULATION BY CERTAIN AQUATIC MACROPHYTES FROM LAKE SEVAN (ARMENIA)
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ABSTRACT: General contamination of heavy metals in the environment is a major global concern, which has provoked the emergence of phytoremediation technologies for cleaning aquatic environment. Heavy metals are released into the environment from a wide range of natural and anthropogenic sources. Macrophytes are known as good indicators of heavy metal contamination in aquatic ecosystems and they act as biological filters by accumulating heavy metals from the surrounding environments. Concentrations of heavy metals such as Hg, Cd, Co, Cu, Mo, Ni, Pb, Tl and Zn were measured in macrophytes and water samples from the mouth of five rivers namely; Gavaraget, Argichi, Makenis, Masrik each of them meeting the Lake Sevan, Armenia. The collected plants were Batrachium rionii, Myosotis palustris, Lythrum salicaria, Scrophularia alata, Calamagrostis epigeios, Lepidium latifolium, Glyceria plicata, Veronica anagallis-aquatica, Butomus umbellatus, Sparganium erectum. The highest concentration of Ni (5.5 mg/kg) was observed in Glyceria plicata whereas concentrations (mg/kg) of all other metals were highest (Hg, 0.02; Cd, 0.46; Co, 3; Cu, 18.9; Pb, 6.9; Tl, 0.13 and Zn, 113) in Batrachium rionii. Range and trend in concentrations of Co (<0.5µg/l), Cd (<0.5µg/l), Tl (<0.1µg/l) and Hg (<0.3µg/l) in water samples were similar at all the sites. Occurrence of heavy metals was much higher in macrophytes and water from Gavaraget and Masrik than that of the Argichi and Makenis due to the discharge of sewage into the river Gavaraget and industrial wastewaters into the river Masrik. The fact that the concentrations of different heavy metals in these macrophytes were far higher than in their respective water column indicates to their role in the biogeochemical cycles of heavy metals. This study aimed at understanding the importance of macrophytes in accumulation of heavy metals and suggesting remedial measures for the preservation and restoration of the lake ecosystem.The 12th World Lake Conference; 01/2008 -
SourceAvailable from: Jaysankar De
Article: Characterization of marine bacteria highly resistant to mercury exhibiting multiple resistances to toxic chemicals
J. De, N. Ramaiah[show abstract] [hide abstract]
ABSTRACT: Several strains of bacteria unusually highly resistant to mercury were isolated from seawater and marine sediment samples and identified by 16S rDNA sequencing and were also characterized by a battery of biochemical and morphological tests. The bacterial isolates were identified to belong to the genera Pseudomonas, Alcaligenes, Brevibacterium and Bacillus. Many of the chosen isolates were tested for growth in the presence of different heavy metals and a variety of xenobiotics. Growth curves of all six bacteria highly resistant to mercury examined for growth at different concentrations of Hg exhibited prolonged lag phase, during which time necessary physiological adaptations to toxic milieu were undergone. All the strains tested for antibiotic resistance showed little to no effect of antibiotics on their normal growth. Results of this study demonstrate the occurrence of diverse groups of marine prokaryotes capable of high tolerance to mercury with a potential to degrade a variety of toxic heavy metals and xenobiotics.Ecological Indicators 07/2007; 7(3):511–520. · 2.69 Impact Factor -
SourceAvailable from: Jaysankar De
Article: Occurrence of large fractions of mercury-resistant bacteria in the Bay of Bengal
De Jaysankar, N. Ramaiah[show abstract] [hide abstract]
ABSTRACT: As insights from tolerance responses of native microflora are useful in deciphering their involvement in biogeochemical cycling of heavy metals, we enumerated mercury resistant bacteria (MRB) using sea water nutrient agar medium amended with 10 ppm Hg from oceanic and coastal waters of the Bay of Bengal (BOB) during the summer monsoon (July–August 2001) period. MRB were present in all samples and, intriguingly, the MRB percent based on total viable counts (TVC) increased significantly (r = 0.86; P less than 0.001; df = 44) with depth. On an average, MRB contributed to over 20% of TVC on the surface, 12% at 100 m, 35% at 500 m and a staggering 49% at 1000 m. The fact that a major portion of the natural, culturable bacterial flora was mercury-resistant from the offshore regions of the BOB points to the global nature of mercury pollution. The higher percentages of MRB in the offshore waters of the BOB might signify the already prevalent adverse impact of heavy metals on the metabolic performance of heterotrophic microflora.Current science 08/2006; 91(3):368-372. · 0.94 Impact Factor