Geert De Groof |
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PhD (Biomedical Sciences)
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Skills (13)
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329 Questions34172 Followers
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Research experience
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Oct 2010–
presentResearch: Functional plasticity of auditory and visual systems of songbirds in a seasonal context.
Universiteit Antwerpen · Departement Biomedische Wetenschappen · Bio-Imaging LabBelgium · AntwerpenFWO Postdoctoral Fellowship -
Oct 2004–
Oct 2010Research: In vivo MRI study of the seasonal and hormonal influence on neuroplasticity in songbirds
Universiteit Antwerpen · Departement Biomedische Wetenschappen · Bio-Imaging LabBelgium · AntwerpenFWO Aspirant Fellowship
Education
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Oct 2004–
Oct 2010Universiteit Antwerpen
Biomedical Sciences · PhD in Biomedical SciencesBelgium · Antwerpen -
Sep 2003–
Jul 2004Universiteit Antwerpen
Biomedical Sciences · Master after Master Biomedical ImagingBelgium · Antwerpen -
Sep 2001–
Jul 2003Universiteit Antwerpen
Biomedical Sciences · Master Biomedical SciencesBelgium · Antwerpen -
Sep 1999–
Jul 2001Universiteit Antwerpen
Biomedical Sciences · Bachelor Biomedical SciencesBelgium · Antwerpen
Awards & achievements
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May 2011Award: Poster Prize award 9th bi-annual meeting of the Belgian Society for Neuroscience
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Oct 2010Grant: FWO postdoctoral fellowship
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Oct 2006Grant: FWO aspirant mandate
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Sep 2004Award: Cum Laude Award 21st Annual Sceintific ESMRMB meeting
Other
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LanguagesDutch, English, French, German
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Scientific MembershipsInternational Society of Magnetic Resnonance and Medicine (ISMRM)
Society for NeuroScience (SfN) -
Journal RefereesNeuroImage, NMR in Biomedicine, Journal of Neuroscience, PLoS ONE
Publications (12) View all
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Article: Functional MRI and Functional Connectivity of the Visual System of Awake Pigeons.
Geert De Groof, Elisabeth Jonckers, Onur Güntürkün, Petra Denolf, Johan Van Auderkerke, Annemie Van der Linden[show abstract] [hide abstract]
ABSTRACT: At present, functional MRI (fMRI) is increasingly used in animal research but the disadvantage is that the majority of the imaging is applied in anaesthetized animals. Only a few articles present results obtained in awake rodents. In this study both traditional fMRI and resting state (rsfMRI) were applied to four pigeons, that were trained to remain still while being imaged, removing the need for anesthesia. This is the first time functional connectivity measurements are performed in a non-mammalian species. Since the visual system of pigeons is a well-known model for brain asymmetry, the focus of the study was on the neural substrate of the visual system. For fMRI a visual stimulus was used and functional connectivity measurements were done with the Entopallium (E; analogue for the primary visual cortex) as a seed region. Interestingly in awake pigeons the left E was significantly functionally connected to the right E. Moreover we compared connectivity maps for a seed region in both hemispheres resulting in a stronger bilateral connectivity starting from left E then from right E. These results could be used as a starting point for further imaging studies in awake birds and also provide a new window into the analysis of hemispheric dominance in the pigeon.Behavioural brain research 11/2012; · 3.22 Impact Factor -
Article: Current state-of-the-art of auditory functional MRI (fMRI) on zebra finches: Technique and scientific achievements.
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ABSTRACT: Songbirds provide an excellent model system exhibiting vocal learning associated with an extreme brain plasticity linked to quantifiable behavioral changes. This animal model has thus far been intensively studied using electrophysiological, histological and molecular mapping techniques. However, these approaches do not provide a global view of the brain and/or do not allow repeated measures, which are necessary to establish correlations between alterations in neural substrate and behavior. In contrast, functional Magnetic Resonance Imaging (fMRI) is a non-invasive in vivo technique which allows one (i) to study brain function in the same subject over time, and (ii) to address the entire brain at once. During the last decades, fMRI has become one of the most popular neuroimaging techniques in cognitive neuroscience for the study of brain activity during various tasks ranging from simple sensory-motor to highly cognitive tasks. By alternating various stimulation periods with resting periods during scanning, resting and task-specific regional brain activity can be determined with this technique. Despite its obvious benefits, fMRI has, until now, only been sparsely used to study cognition in non-human species such as songbirds. The Bio-Imaging Lab (University of Antwerp, Belgium) was the first to implement Blood Oxygen Level Dependent (BOLD) fMRI in songbirds - and in particular zebra finches - for the visualization of sound perception and processing in auditory and song control brain regions. The present article provides an overview of the establishment and optimization of this technique in our laboratory and of the resulting scientific findings. The introduction of fMRI in songbirds has opened new research avenues that permit experimental analysis of complex sensorimotor and cognitive processes underlying vocal communication in this animal model.Journal of Physiology-Paris 08/2012; · 1.31 Impact Factor -
Article: A 3-dimensional digital atlas of the ascending sensory and the descending motor systems in the pigeon brain.
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ABSTRACT: Pigeons are classic animal models for learning, memory, and cognition. The majority of the current understanding about avian neurobiology outside of the domain of the song system has been established using pigeons. Since MRI represents an increasingly relevant tool for comparative neuroscience, a 3-dimensional MRI-based atlas of the pigeon brain becomes essential. Using multiple imaging protocols, we delineated diverse ascending sensory and descending motor systems as well as the hippocampal formation. This pigeon brain atlas can easily be used to determine the stereotactic location of identified neural structures at any angle of the head. In addition, the atlas is useful to find the optimal angle of sectioning for slice experiments, stereotactic injections and electrophysiological recordings. This pigeon brain atlas is freely available for the scientific community.Brain Structure and Function 02/2012; · 5.63 Impact Factor -
Article: Microstructural changes observed with DKI in a transgenic Huntington rat model: evidence for abnormal neurodevelopment.
Ines Blockx, Geert De Groof, Marleen Verhoye, Johan Van Audekerke, Kerstin Raber, Dirk Poot, Jan Sijbers, Alexander P Osmand, Stephan Von Hörsten, Annemie Van der Linden[show abstract] [hide abstract]
ABSTRACT: Huntington Disease (HD) is a fatal neurodegenerative disorder, caused by a mutation in the Huntington gene. Although HD is most often diagnosed in mid-life, the key to its clinical expression may be found during brain maturation. In the present work, we performed in vivo diffusion kurtosis imaging (DKI) in order to study brain microstructure alterations in developing transgenic HD rat pups. Several developing brain regions, relevant for HD pathology (caudate putamen, cortex, corpus callosum, external capsule and anterior commissure anterior), were examined at postnatal days 15 (P15) and 30 (P30), and DKI results were validated with histology. At P15, we observed higher mean (MD) and radial (RD) diffusivity values in the cortex of transgenic HD rat pups. In addition, at the age of P30, lower axial kurtosis (AK) values in the caudate putamen of transgenic HD pups were found. At the level of the external capsule, higher MD values at P15 but lower MD and AD values at P30 were detected. The observed DKI results have been confirmed by myelin basic protein immunohistochemistry, which revealed a reduced fiber staining as well as less ordered fibers in transgenic HD rat pups. These results indicate that neuronal development in young transgenic HD rat pups occurs differently compared to controls and that the presence of mutant huntingtin has an influence on postnatal brain development. In this context, various diffusivity parameters estimated by the DKI model are a powerful tool to assess changes in tissue microstructure and detect developmental changes in young transgenic HD rat pups.NeuroImage 08/2011; 59(2):957-67. · 5.89 Impact Factor -
SourceAvailable from: Geert De Groof
Article: Own song selectivity in the songbird auditory pathway: suppression by norepinephrine.
Colline Poirier, Tiny Boumans, Michiel Vellema, Geert De Groof, Thierry D Charlier, Marleen Verhoye, Annemie Van der Linden, Jacques Balthazart[show abstract] [hide abstract]
ABSTRACT: Like human speech, birdsong is a learned behavior that supports species and individual recognition. Norepinephrine is a catecholamine suspected to play a role in song learning. The goal of this study was to investigate the role of norepinephrine in bird's own song selectivity, a property thought to be important for auditory feedback processes required for song learning and maintenance. Using functional magnetic resonance imaging, we show that injection of DSP-4, a specific noradrenergic toxin, unmasks own song selectivity in the dorsal part of NCM, a secondary auditory region. The level of norepinephrine throughout the telencephalon is known to be high in alert birds and low in sleeping birds. Our results suggest that norepinephrine activity can be further decreased, giving rise to a strong own song selective signal in dorsal NCM. This latent own song selective signal, which is only revealed under conditions of very low noradrenergic activity, might play a role in the auditory feedback and/or the integration of this feedback with the motor circuitry for vocal learning and maintenance.PLoS ONE 01/2011; 6(5):e20131. · 4.09 Impact Factor