Ganta V Chaitanya |
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Louisiana State University Health Sciences Center Shreveport
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Department of Physiology
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Questions and Answers (4) View all
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Answer added in Neuroinflammation18 Microglial staining with Iba1 is displaying a lot of background.By Kanchan Bisht · ETH ZurichGanta Chaitanya · Louisiana State University Health Sciences Center ShreveportI recently found out that some antibodies doesnt like blocking step. For example, I was using similar steps in the immunostaining protocol described b... [more]I recently found out that some antibodies doesnt like blocking step. For example, I was using similar steps in the immunostaining protocol described by you for 'RCA-1' staining in brain tissue (PFA fixed, paraffin sections). I got extensive background till I looked into the trouble shooting section for RCA-1 staining, which mentioned 'not to serum block' . I tried and it improved staining pattern! ironic! Anyway I was going through iba staining protocol and found out that iba immunostaining also doesnt need blocking. I am attaching the reference here. It is quite difficult to believe...but try to give this protocol a shot. All the best! http://www.ihcworld.com/_protocols/antibody_protocols/iba1_wako.htm.Following
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Answer added in Neurobiology9 Does anyone know of an antibody to demonstrate changes in neuronal dendrites following ischemic damage?By James Bourne · Monash UniversityGanta Chaitanya · Louisiana State University Health Sciences Center ShreveportSynaptophysin or neuronal filament antibodies might also be useful markers. If you have expertise, I consider Golgi staining as one of the best metho... [more]Synaptophysin or neuronal filament antibodies might also be useful markers. If you have expertise, I consider Golgi staining as one of the best methods to understand the density of neuronal dendrites. However, it is not immunostaining and the method is quite complex and requires a level of expertise. All the best.Following
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Answer added in Angiogenesis10 Is there a way to grow HUVECs on a matrigel coated permeable insert to form a confluent monolayer as opposed to differentiate into tubes?By Yavor Denchev · University of VictoriaGanta Chaitanya · Louisiana State University Health Sciences Center ShreveportHi Yavor, In my experiments, we perform TEER measurements and matrigel separately. I think once the cells are plated on matrigel, since they try to f... [more]Hi Yavor, In my experiments, we perform TEER measurements and matrigel separately. I think once the cells are plated on matrigel, since they try to form the tubes and no longer in a continuous monolayer, it is difficult to get TEER readings. Typically most of the cells like HBMEC3, HCMEC-D3, bEnd3 or LECs form tube like structures on matrigel support in 3-5hours (in our lab). I dont think how feasible it is to grow cells on matrigel and still be in monolayer for TEER mesurements. You can try the transwell inserts without matrigel for TEER readings and at the time point of your interest, tyrpsinize them and plate on matrigel coated plates to check for the tube formation!? But I didnot come across any experiment that allowed growing endothelium on matrigel without formation of tubes either with growth factor reduced or growth factor supplemented. Best of luck! Vijay.Following
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Answer added in Cell Culture4 Will 3D matrix (matrigel, cultrex, etc) help?By Bernard Okere · Università degli Studi di Modena e Reggio EmiliaGanta Chaitanya · Louisiana State University Health Sciences Center ShreveportExtracellular matrix proteins can influence the characters of epithelial/endothelial cells. I used matrigel not for growing or differentiation of epit... [more]Extracellular matrix proteins can influence the characters of epithelial/endothelial cells. I used matrigel not for growing or differentiation of epithelial cells but for performing capillary tube formation/angiogenesis assay. Gelatin, rat tail collagen, fibronectin are commonly used depending on the cell type. In my experiments coating plates with rat tail collagen works best epithelial/endothelial cell cultures' growth (I use rat collagen to grow mainly human brain endothelium, primary mouse brain endothelial cultures) but I dont see any cell differentiation.Following
Publications (22) View all
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Article: Focus on carbon monoxide: a modulator of neutrophil oxidants and elastase spatial localization?
V C Ganta, J S Alexander[show abstract] [hide abstract]
ABSTRACT: The protective roles of CO in various patho-physiological conditions are rapidly expanding. We are only beginning to understand how this gaseous signal molecule exerts such diverse cell and model specific effects. CO interacts in NO signaling, and is an activator of guanylate cyclase/PKG. However several downstream molecular signals mediated by CO (p38-MAPK, ERK1/2) may be oxidant dependent. How CO affects these and other signaling pathways in PMN is not well understood, but is of immense clinical interest. The present study by Mizoguchi et al. describes cell-specific roles of CORM-3 derived CO in protecting the lung against neutrophil dependent septic injury. Importantly, CO donors appear to only affect neutrophils and may involve a novel mechanism whereby CO induces the shedding of neutrophil elastase from the active front of the neutrophil. Shedding of this protease, and neutrophil rolling and adhesion were also inhibited by CO in a novel fashion involving elevation of ROS species. The involvement of various cellular ROS production sites (especially mitochondria); their mechanisms and the potential therapeutic benefit of CO donors like CORM-3 are discussed. Key words: elastase, hemoxygenase, lung injury, CO.AJP Heart and Circulatory Physiology 08/2009; 297(3):H902-4. · 3.71 Impact Factor -
SourceAvailable from: Ganta V Chaitanya
Article: Discovery of transcriptional programs in cerebral ischemia by in silico promoter analysis.
Dirk A Ridder, Svetlana Bulashevska, Ganta Vijay Chaitanya, Phanithi Prakash Babu, Benedikt Brors, Roland Eils, Armin Schneider, Markus Schwaninger[show abstract] [hide abstract]
ABSTRACT: In stroke, gene transcription plays a central role in processes such as neuroinflammation and neuroregeneration. To predict new transcriptional regulatory mechanisms in cerebral ischemia, we applied a computational approach combining two kinds of information: the results of a microarray analysis in a mouse model of stroke and in silico detection of transcription factor (TF) binding sites in promoter regions of the genes on the array. By using a discriminative logistic regression model, we identified binding sites significantly associated with the up-regulation of genes. Out of 356 TF binding sites defined in TRANSFAC, we could link 32 to gene up-regulation in cerebral ischemia. These sites bind both TFs with an established and a so far unknown role in cerebral ischemia. To evaluate the results further we investigated whether two TFs, CCAAT/enhancer binding protein beta (C/EBP beta) and vitamin D receptor (VDR), are activated as predicted. Immunohistochemistry demonstrated that C/EBP beta and VDR translocated to the nucleus in cerebral ischemia. Chromatin immunoprecipitation revealed increased binding of C/EBP beta to the promoter of its target gene saa3. In addition, we found evidence for the up-regulation of VDR in brain samples from human stroke patients. These results confirm the activation of C/EBP beta and VDR in cerebral ischemia. Thus, our in silico analysis may provide additional information on transcriptional regulation in stroke and suggests several novel transcriptional programs for further exploration.Brain research 04/2009; 1272:3-13. · 2.46 Impact Factor -
SourceAvailable from: Ganta V Chaitanya
Article: Granzyme-b mediated cell death in the spinal cord-injured rat model.
Ganta Vijay Chaitanya, Mayuri Kolli, Phanithi Prakash Babu[show abstract] [hide abstract]
ABSTRACT: Spinal cord injury initiates a complex series of inflammatory and immune responses including the influx of monocytes, macrophages, T-cells, NK cells and so on, into the injured area. In the present study, we found a significant increase in the levels of granzyme-b (gra-b) from the first day after the transection until the third day, with decrease in intensity thereafter. The chemokine IP-10/CXCL10 was also found to be elevated along with gra-b correlating with the infiltration of CD-8(+) cytotoxic T lymphocytes (CTLs) into the injured spinal cord. We observed an increase in the levels of the 64 kDa poly ADP ribose polymerase fragment, known to be a signature fragment produced by gra-b. Localization of gra-b in TUNEL positive neurons indicates that gra-b might play a crucial role in neuronal death and contributes to the pathophysiology of spinal cord injury.Neuropathology 01/2009; 29(3):270-9. · 2.02 Impact Factor -
Article: Expanding roles of glutamate receptors in neurovascular regulation.
J S Alexander, Chaitanya V GantaVascular Pharmacology 03/2012; 57(1):1-2. · 1.99 Impact Factor -
SourceAvailable from: Ganta V Chaitanya
Article: Multiple apoptogenic proteins are involved in the nuclear translocation of Apoptosis Inducing Factor during transient focal cerebral ischemia in rat.
Ganta Vijay Chaitanya, Phanithi Prakash Babu[show abstract] [hide abstract]
ABSTRACT: Apoptosis Inducing Factor is a mitochondrial protein which upon translocation to nucleus causes large scale DNA fragmentation. The stimulus for the cytosolic release and nuclear translocation for this protein still remains to be understood. The role of calpains, cathepsin-b, Poly ADP (ribose) Polymerase and granzyme-b in the nuclear translocation of AIF has been investigated in the pathology of cerebral ischemia. Calpains, cathepsin-b and PARP-1 which were mostly confined to cytosol, lysosomes and nucleus respectively were found to be elevated in the mitochondrial fraction interacting with AIF in the western blot analysis and double immunofluorescence analysis. Western blot and immunohistochemical analysis revealed elevated levels of granzyme-b secreted by cytotoxic T lymphocytes and natural killer cells in the infarct of ischemic mouse brain. Co-immunoprecipitation revealed and western blot analysis the interaction and break down of Heat Shock Protein-70 an endogenous inhibitor of AIF into signature fragments by granzyme-b facilitating the nuclear translocation of AIF. Break down of HSP-70 correlated with the nuclear translocation of AIF observed in western and immunohistochemical analysis. These results indicate that multiple proteases were involved in the nuclear translocation of AIF during the pathology of cerebral ischemia.Brain research 11/2008; 1246:178-90. · 2.46 Impact Factor