Institute of Integrative Biology

Publications (147)

• Source

  Available from: liv.ac.uk

  Article: Paternal genome effects on aging: evidence for a role of Rasgrf1 in longevity determination?

  João Pedro de Magalhães
  Mechanisms of ageing and development 132(1-2):72-3. · 4.18 Impact Factor
• Article: Extent, Environmental Impact and Long-term Trends in Atmospheric Contamination in the Usa Basin of East-European Russian Arctic

  N. Solovieva, V. J. Jones, P. G. Appleby, B. M. Kondratenok
  Water Air and Soil Pollution 01/2002; 139(1):237-260. · 1.63 Impact Factor
• Article: Stx-phages: drivers and mediators of the evolution of STEC and STEC-like pathogens.

  Heather E Allison
  Future Microbiology 05/2007; 2(2):165-74. · 3.82 Impact Factor
• Article: Identification of multiple integration sites for Stx-phage Phi24B in the Escherichia coli genome, description of a novel integrase and evidence for a functional anti-repressor.

  Paul C M Fogg, Sharon M Gossage, Darren L Smith, Jon R Saunders, Alan J McCarthy, Heather E Allison
  Microbiology 01/2008; 153(Pt 12):4098-110. · 3.06 Impact Factor
• Article: Advances in biophysical methods: characterisation and visualization of molecules, cells and organism.

  S Samar Hasnain, Soichi Wakatsuki
  Current Opinion in Structural Biology 09/2010; 20(5):584-6. · 9.42 Impact Factor
• Article: Social cues of sperm competition influence accessory reproductive gland size in a promiscuous mammal.

  Jean-François Lemaître, Steven A Ramm, Jane L Hurst, Paula Stockley
  Proceedings of the Royal Society B: Biological Sciences 09/2010; 278(1709):1171-6. · 5.41 Impact Factor
• Article: Host defence: getting by with a little help from our friends.

  Gregory D D Hurst, Kate J Hutchence
  Current biology: CB 09/2010; 20(18):R806-8. · 10.99 Impact Factor
• Article: Heparan sulfate glycomics: towards systems biology strategies.

  Jeremy E Turnbull
  Biochemical Society Transactions 10/2010; 38(5):1356-60. · 3.71 Impact Factor
• Source

  Available from: montana.edu

  Article: Taming anxiety in laboratory mice.

  Jane L Hurst, Rebecca S West
  Nature Methods 10/2010; 7(10):825-6. · 19.28 Impact Factor
• Article: Is oxidative stress a physiological cost of reproduction? An experimental test in house mice.

  Michael Garratt, Aphrodite Vasilaki, Paula Stockley, Francis McArdle, Malcolm Jackson, Jane L Hurst
  Proceedings of the Royal Society B: Biological Sciences 10/2010; 278(1708):1098-106. · 5.41 Impact Factor
• Source

  Available from: Andrew K. Turner

  Article: The analysis of immunological profiles in wild animals: a case study on immunodynamics in the field vole, Microtus agrestis.

  Joseph A Jackson, Michael Begon, Richard Birtles, Steve Paterson, Ida M Friberg, Amy Hall, Ann Lowe, Catriona Ralli, Andrew Turner, Malgorzata Zawadzka, Janette E Bradley
  Molecular Ecology 11/2010; 20(5):893-909. · 5.52 Impact Factor
• Source

  Available from: Miroslav Z Papiz

  Article: STRU-cloning: a fast, inexpensive and efficient cloning procedure applicable to both small scale and structural genomics size cloning.

  Dom Bellini, Anthony P Fordham-Skelton, Miroslav Z Papiz
  Molecular Biotechnology 11/2010; 48(1):30-7. · 2.17 Impact Factor
• Article: Disaccharide compositional analysis of heparan sulfate and heparin polysaccharides using UV or high-sensitivity fluorescence (BODIPY) detection.

  Mark A Skidmore, Scott E Guimond, Audrey F Dumax-Vorzet, Edwin A Yates, Jeremy E Turnbull
  Nature Protocol 12/2010; 5(12):1983-92. · 8.36 Impact Factor
• Article: Magnitude of the Root effect in red blood cells and haemoglobin solutions of fishes: a tribute to August Krogh.

  M Berenbrink, P Koldkjær, E Hannah Wright, O Kepp, A José da Silva
  Acta Physiologica 12/2010; 202(3):583-92. · 3.09 Impact Factor
• Source

  Available from: Rob Beynon

  Article: Positional proteomics at the N-terminus as a means of proteome simplification.

  Gemma R Davidson, Stuart D Armstrong, Robert J Beynon
  Methods in molecular biology (Clifton, N.J.) 01/2011; 753:229-42.
• Article: Protein turnover methods in single-celled organisms: dynamic SILAC.

  Amy J Claydon, Robert J Beynon
  Methods in molecular biology (Clifton, N.J.) 01/2011; 759:179-95.
• Source

  Available from: Olga Olegovna (other last name: Vassieva) Vasieva

  Article: Role of Shwachman-Bodian-Diamond syndrome protein in translation machinery and cell chemotaxis: a comparative genomics approach.

  Olga Vasieva
  Advances and Applications in Bioinformatics and Chemistry 01/2011; 4:43-50.
• Source

  Available from: Prudence W. H. Wong

  Article: New structural and functional contexts of the Dx[DN]xDG linear motif: insights into evolution of calcium-binding proteins.

  Daniel J Rigden, Duncan D Woodhead, Prudence W H Wong, Michael Y Galperin
  PLoS ONE 01/2011; 6(6):e21507. · 4.09 Impact Factor
• Source

  Available from: Rob Beynon

  Article: Asymmetric proteome equalization of the skeletal muscle proteome using a combinatorial hexapeptide library.

  Jenny Rivers, Chris Hughes, Thérèse McKenna, Yvonne Woolerton, Johannes P C Vissers, James I Langridge, Robert J Beynon
  PLoS ONE 01/2011; 6(12):e28902. · 4.09 Impact Factor
• Source

  Available from: Lee Philip Haynes

  Article: Characterisation of the interaction of the C-terminus of the dopamine D2 receptor with neuronal calcium sensor-1.

  Lu-Yun Lian, Sravan R Pandalaneni, Pryank Patel, Hannah V McCue, Lee P Haynes, Robert D Burgoyne
  PLoS ONE 01/2011; 6(11):e27779. · 4.09 Impact Factor
• Source

  Available from: Daniel J Rigden

  Article: Characterisation of a desmosterol reductase involved in phytosterol dealkylation in the silkworm, Bombyx mori.

  Leonora F Ciufo, Patricia A Murray, Anu Thompson, Daniel J Rigden, Huw H Rees
  PLoS ONE 01/2011; 6(6):e21316. · 4.09 Impact Factor
• Source

  Available from: Olga Olegovna (other last name: Vassieva) Vasieva

  Article: A data mining approach for classifying DNA repair genes into ageing-related or non-ageing-related.

  Alex A Freitas, Olga Vasieva, João Pedro de Magalhães
  BMC Genomics 01/2011; 12:27. · 4.07 Impact Factor
• Article: Ab initio modeling led annotation suggests nucleic acid binding function for many DUFs.

  Daniel J Rigden
  Omics: a journal of integrative biology 02/2011; 15(7-8):431-8. · 2.29 Impact Factor
• Article: Evolutionary genomics of Entamoeba.

  Gareth D Weedall, Neil Hall
  Research in Microbiology 02/2011; 162(6):637-45. · 2.76 Impact Factor
• Article: The cooperation of FGF receptor and Klotho is involved in excretory canal development and regulation of metabolic homeostasis in Caenorhabditis elegans.

  Urszula M Polanska, Elisabeth Edwards, David G Fernig, Tarja K Kinnunen
  Journal of Biological Chemistry 02/2011; 286(7):5657-66. · 4.77 Impact Factor
• Article: Coevolving parasites enhance the diversity-decreasing effect of dispersal.

  Tom Vogwill, Andy Fenton, Michael A Brockhurst
  Biology letters 02/2011; 7(4):578-80. · 3.76 Impact Factor
• Source

  Available from: Olga Olegovna (other last name: Vassieva) Vasieva

  Article: The many faces of glutathione transferase pi.

  O Vasieva
  Current Molecular Medicine 02/2011; 11(2):129-39. · 5.10 Impact Factor
• Article: Frontiers in host-parasite ecology and evolution.

  Steve Paterson, Stuart B Piertney
  Molecular Ecology 03/2011; 20(5):869-71. · 5.52 Impact Factor
• Article: Next-generation sequencing as a tool to study microbial evolution.

  Michael A Brockhurst, Nick Colegrave, Daniel E Rozen
  Molecular Ecology 03/2011; 20(5):972-80. · 5.52 Impact Factor
• Article: How do insects react to novel inherited symbionts? A microarray analysis of Drosophila melanogaster response to the presence of natural and introduced Spiroplasma.

  Kate J Hutchence, Bettina Fischer, Steve Paterson, Gregory D D Hurst
  Molecular Ecology 03/2011; 20(5):950-8. · 5.52 Impact Factor
• Article: A systems biology approach for the investigation of the heparin/heparan sulfate interactome.

  Alessandro Ori, Mark C Wilkinson, David G Fernig
  Journal of Biological Chemistry 03/2011; 286(22):19892-904. · 4.77 Impact Factor
• Source

  Available from: Jenna Kenyani

  Article: A DIGE study on the effects of salbutamol on the rat muscle proteome - an exemplar of best practice for data sharing in proteomics.

  Jenna Kenyani, J Alberto Medina-Aunon, Salvador Martinez-Bartolomé, Juan-Pablo Albar, Jonathan M Wastling, Andrew R Jones
  BMC Research Notes 03/2011; 4:86.
• Source

  Available from: Jennifer Cooper

  Article: Prey-dependent mortality rate: a critical parameter in microbial models.

  Ewan J A Minter, Andy Fenton, Jennifer Cooper, David J S Montagnes
  Microbial Ecology 03/2011; 62(1):155-61. · 2.91 Impact Factor
• Source

  Available from: PubMed Central

  Article: A role for Ras signaling in modulating mammalian aging by the GH/IGF1 axis.

  João Pedro de Magalhães
  Aging 04/2011; 3(4):336-7. · 5.13 Impact Factor
• Source

  Available from: PubMed Central

  Article: The ancestral role of ATP hydrolysis in type II topoisomerases: prevention of DNA double-strand breaks.

  Andrew D Bates, James M Berger, Anthony Maxwell
  Nucleic Acids Research 04/2011; 39(15):6327-39. · 8.03 Impact Factor
• Article: A review and appraisal of the DNA damage theory of ageing.

  Alex A Freitas, João Pedro de Magalhães
  Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis 05/2011; 728(1-2):12-22. · 2.85 Impact Factor
• Article: Industrial melanism in British peppered moths has a singular and recent mutational origin.

  Arjen E van't Hof, Nicola Edmonds, Martina Dalíková, Frantisek Marec, Ilik J Saccheri
  Science 05/2011; 332(6032):958-60. · 31.20 Impact Factor
• Article: Patterns of genetic divergence among populations of the common dormouse, Muscardinus avellanarius in the UK.

  Darlina Md Naim, Sandra Telfer, Sue Tatman, Sarah Bird, Stephen J Kemp, Rhian Hughes, Phillip C Watts
  Molecular Biology Reports 05/2011; 39(2):1205-15. · 2.93 Impact Factor
• Source

  Available from: PubMed Central

  Article: Evidence of gene conversion in genes encoding the Gal/GalNac lectin complex of Entamoeba.

  Gareth D Weedall, James Sherrington, Steve Paterson, Neil Hall
  PLoS Neglected Tropical Diseases 06/2011; 5(6):e1209. · 4.69 Impact Factor
• Article: The importance of the digest: proteolysis and absolute quantification in proteomics.

  Philip Brownridge, Robert J Beynon
  Methods 06/2011; 54(4):351-60. · 4.01 Impact Factor
• Article: Structure and epitope distribution of heparan sulfate is disrupted in experimental lung hypoplasia: a glycobiological epigenetic cause for malformation?

  Sophie M Thompson, Marilyn G Connell, Toin H van Kuppevelt, Ruoyan Xu, Jeremy E Turnbull, Paul D Losty, David G Fernig, Edwin C Jesudason
  BMC Developmental Biology 06/2011; 11:38. · 2.79 Impact Factor
• Source

  Available from: Rob Beynon

  Article: Global absolute quantification of a proteome: Challenges in the deployment of a QconCAT strategy.

  Philip Brownridge, Stephen W Holman, Simon J Gaskell, Christopher M Grant, Victoria M Harman, Simon J Hubbard, Karin Lanthaler, Craig Lawless, Ronan O'Cualain, Paul Sims, Rachel Watkins, Robert J Beynon
  Proteomics 06/2011; 11(15):2957-70. · 4.43 Impact Factor
• Article: The structural plasticity of the human copper chaperone for SOD1: insights from combined size-exclusion chromatographic and solution X-ray scattering studies.

  Gareth S A Wright, S Samar Hasnain, J Günter Grossmann
  Biochemical Journal 07/2011; 439(1):39-44. · 4.90 Impact Factor
• Article: Evolution. Sex, death, and the Red Queen.

  Michael A Brockhurst
  Science 07/2011; 333(6039):166-7. · 31.20 Impact Factor
• Source

  Available from: Anne Lizé

  Article: Perception of male-male competition influences Drosophila copulation behaviour even in species where females rarely remate.

  Anne Lizé, Rowan J Doff, Eve A Smaller, Zenobia Lewis, Gregory D D Hurst
  Biology letters 07/2011; 8(1):35-8. · 3.76 Impact Factor
• Source

  Available from: PubMed Central

  Article: Host-Parasite interactions in Entamoeba histolytica and Entamoeba dispar: what have we learned from their genomes?

  I W Wilson, G D Weedall, N Hall
  Parasite Immunology 08/2011; 34(2-3):90-9. · 2.60 Impact Factor
• Article: Identification and modelling of a PPM protein phosphatase fold in the Legionella pneumophila deAMPylase SidD.

  Daniel J Rigden
  FEBS letters 08/2011; 585(17):2749-54. · 3.54 Impact Factor
• Source

  Available from: Rob Beynon

  Article: The scent of senescence: sexual signalling and female preference in house mice.

  M Garratt, P Stockley, S D Armstrong, R J Beynon, J L Hurst
  Journal of Evolutionary Biology 08/2011; 24(11):2398-409. · 3.28 Impact Factor
• Article: Solving the Wolbachia paradox: modeling the tripartite interaction between host, Wolbachia, and a natural enemy.

  Andrew Fenton, Karyn N Johnson, Jeremy C Brownlie, Gregory D D Hurst
  The American Naturalist 09/2011; 178(3):333-42. · 4.72 Impact Factor
• Source

  Available from: Svetlana Antonyuk

  Article: Carbon monoxide poisoning is prevented by the energy costs of conformational changes in gas-binding haemproteins.

  Svetlana V Antonyuk, Neil Rustage, Christine A Petersen, Jamie L Arnst, Derren J Heyes, Raman Sharma, Neil G Berry, Nigel S Scrutton, Robert R Eady, Colin R Andrew, S Samar Hasnain
  Proceedings of the National Academy of Sciences 09/2011; 108(38):15780-5. · 9.68 Impact Factor